GenomeNet

Database: UniProt
Entry: A0A078HF66_BRANA
LinkDB: A0A078HF66_BRANA
Original site: A0A078HF66_BRANA 
ID   A0A078HF66_BRANA        Unreviewed;       321 AA.
AC   A0A078HF66;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   31-JUL-2019, entry version 26.
DE   SubName: Full=BnaA04g25930D protein {ECO:0000313|EMBL:CDY37015.1};
GN   Name=BnaA04g25930D {ECO:0000313|EMBL:CDY37015.1};
GN   ORFNames=GSBRNA2T00063218001 {ECO:0000313|EMBL:CDY37015.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae;
OC   Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY37015.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY37015.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X.,
RA   Chiquet J., Belcram H., Tong C., Samans B., Correa M., Da Silva C.,
RA   Just J., Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P.,
RA   Noel B., Labadie K., Alberti A., Charles M., Arnaud D., Guo H.,
RA   Daviaud C., Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H.,
RA   Tack D., Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G.,
RA   Renault V., Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H.,
RA   Chalabi S., Hu Q., Fan C., Tollenaere R., Lu Y., Battail C., Shen J.,
RA   Sidebottom C.H., Wang X., Canaguier A., Chauveau A., Berard A.,
RA   Deniot G., Guan M., Liu Z., Sun F., Lim Y.P., Lyons E., Town C.D.,
RA   Bancroft I., Wang X., Meng J., Ma J., Pires J.C., King G.J.,
RA   Brunel D., Delourme R., Renard M., Aury J.M., Adams K.L., Batley J.,
RA   Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W., Sharpe A.G.,
RA   Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; LK032390; CDY37015.1; -; Genomic_DNA.
DR   EnsemblPlants; CDY37015; CDY37015; GSBRNA2T00063218001.
DR   Gramene; CDY37015; CDY37015; GSBRNA2T00063218001.
DR   OMA; SWTHLFQ; -.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR006712; HD-ZIP_N.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF04618; HD-ZIP_N; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00340; HALZ; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000028999};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT   DOMAIN      151    211       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND    153    212       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION      101    155       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      277    321       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED      224    244       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS    121    155       Polyampholyte. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
SQ   SEQUENCE   321 AA;  34811 MW;  48B1F292F8E56E1B CRC64;
     MGESEDGLGL SLSLGLSQLK EPSLGLGLNL LPLRTSSSSF SHMHNHNNNH LQKKINHNSW
     PHQFHSSERN SDVGSLLRGL EVNRTPSATV VINLEEDLAG VSSPNSNISS VSGNKRDLAA
     ARGDGGGDEN EAERASCSHG GGSDEEEGGN CEGTRKKLRL SKEQALVLED TFKEHSTLNP
     KQKLALAKQL NLRTRQVEVW FQNRRARTKL KQTEVDCEYL KRCCDTLTEE NRRLHKEVAE
     LRALKLSPHL YMHMTPPTTL TMCPSCERVS ASSSSSAMAA AAPPSSITSG GGGRIPTVVG
     RPSPQRPTPC AAISLQSRLA H
//
DBGET integrated database retrieval system