ID A0A078HFU1_BRANA Unreviewed; 407 AA.
AC A0A078HFU1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=BnaC06g06690D protein {ECO:0000313|EMBL:CDY36616.1};
GN Name=BnaC06g06690D {ECO:0000313|EMBL:CDY36616.1};
GN ORFNames=GSBRNA2T00062327001 {ECO:0000313|EMBL:CDY36616.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY36616.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY36616.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032379; CDY36616.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078HFU1; -.
DR STRING; 3708.A0A078HFU1; -.
DR PaxDb; 3708-A0A078HFU1; -.
DR EnsemblPlants; CDY36616; CDY36616; GSBRNA2T00062327001.
DR Gramene; CDY36616; CDY36616; GSBRNA2T00062327001.
DR OMA; NENGYRR; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:1990904; C:ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR CDD; cd00780; NTF2; 1.
DR CDD; cd00590; RRM_SF; 1.
DR Gene3D; 3.10.450.50; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR032710; NTF2-like_dom_sf.
DR InterPro; IPR002075; NTF2_dom.
DR InterPro; IPR018222; Nuclear_transport_factor_2_euk.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR039539; Ras_GTPase_bind_prot.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR10693:SF45; NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN WITH RNA BINDING (RRM-RBD-RNP MOTIFS) DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10693; RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN; 1.
DR Pfam; PF02136; NTF2; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54427; NTF2-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50177; NTF2_DOMAIN; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 15..131
FT /note="NTF2"
FT /evidence="ECO:0000259|PROSITE:PS50177"
FT DOMAIN 263..343
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 150..196
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 211..265
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 348..407
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 390..407
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 407 AA; 43722 MW; D2C48F84F4C1B226 CRC64;
MTPVSNAPSV DAQIVGNAFV QKYYTHLYEK PAEVYKFYLE ESVLGRPGVG GEMVSVKSLK
AINDQIMSVD YQNSKIQILT ADSQASLKSA VVTLVAGLVI GKDGERKSFT QSFFLVPQNG
SYFVLNDVFR YVSDVFVAPE ATKEAEVEVE ESPKEAVPAE PAKEVVEPAA RATNEEKVVN
GNSNLPKAAE AKPQEDTGVK KSFAVIAAQN GAQTNAKASP AKHKPVEKPR VAPQTKAAAP
VAAAPQPKAP SAKTSEQPPA QGGSIFVANL PMDASPEQLF ETFKGFGAIR RGGIQVRSYT
EQRNCFGFVA FENSESIKNV FKAHNESPIF IGNRRASIEE KRGKFLNNGG RAYARNNGNN
RNENGYRRDG YGPRGNGGRG SGRNGPERQS GDAKASQNGH GNAQAKN
//
