ID A0A078HMI3_BRANA Unreviewed; 1082 AA.
AC A0A078HMI3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2274828.1};
DE SubName: Full=BnaA04g11180D protein {ECO:0000313|EMBL:CDY39735.1};
GN Name=BnaA04g11180D {ECO:0000313|EMBL:CDY39735.1};
GN ORFNames=DARMORV10_A04P14620.1 {ECO:0000313|EMBL:CAF2274828.1},
GN GSBRNA2T00068521001 {ECO:0000313|EMBL:CDY39735.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY39735.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY39735.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY39735.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2274828.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994358; CAF2274828.1; -; Genomic_DNA.
DR EMBL; LK032456; CDY39735.1; -; Genomic_DNA.
DR STRING; 3708.A0A078HMI3; -.
DR PaxDb; 3708-A0A078HMI3; -.
DR EnsemblPlants; CDY39735; CDY39735; GSBRNA2T00068521001.
DR Gramene; CDY39735; CDY39735; GSBRNA2T00068521001.
DR OMA; INDLECY; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0006952; P:defense response; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR011713; Leu-rich_rpt_3.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR11017:SF291; ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE-RELATED; 1.
DR PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF07725; LRR_3; 1.
DR Pfam; PF01582; TIR; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 9..173
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
SQ SEQUENCE 1082 AA; 122601 MW; 16FD7EAB78F9E9BB CRC64;
MASSSSCIKR YHVFPSFHGP DVRSGFLSHL RHQFASKGIT TFKDHEIERG HTIGPELVQA
IRESRVSVIL LSKNYASSSW CLDELVEILN CKEASGQIVM TIFYQVDPSD VRKQTGDFGI
AFKKTCEKKT EEDKKRWMEA LAYVANIAGE HSLNWTDEAA MVEKFATDVS NKLNVTLSRD
FEEIVGLQAH LRKLISLLCF ECDEAKMIGI WGPAGIGKST IARALFNHLS SDFRLRCFMG
NLKGSYTSIM GAHGIQDIYH VDFPSSKEAL EILCLAAFKQ RYVQDDFEKV ANRVAYLCGY
LPLGLCVVGS SLRGESKEEW ELQLSRIEAS LDRKIEDILR VGYDRLSKKN QSIFLHIACM
FNDTFVDDYV TSMLADSNLD VENGMKTLAV NSLVKFSNPY CKKSLDMHYL LKQLGRQVVH
EQADEPGKRQ YLVEPEEIRD VLTKETGTGS VIGDMEYLPH LRLLHWDSYP RKRLPPTFQP
QCLVELCMDY SNLKKLWGGI QPLANLKTLN LGYSMKLKEI PNLSEATNLE TLTLEGCTSL
VELPSSIRNL HKLEKLNLKG CKKLRIIPTN INLASLEEVN MDGCSRLRTF PDISRNISRL
DVRNTKIEDV PASVAESWLR LEKFHIGSKS LKRLTHVPEC VSNLDLSNSA IKKIPDCVIG
LPGLRSLSII NCRKLVSLQG LPPSLLSLDA DDCVLLKSVC LSFSEPKSAG IRLFNCFSLE
EEARRVIIQQ CDYESVCLPG KEIPPDFTHR AKGNSITIIS SGTFSASSRF KACLLLPPDE
YTGRTVCRLI SKGVVINKLE FYSFHHTLLS EHLLVFSGAV LKEHICCELE ATTSEIRFEF
DRKYVIECGV QMLADEGEIK LASSFHDPNR EVRFINCMKL DEEARRAIVQ GWAYKYVCFP
GKQIPAEFTH KATGNSITIT KGTLSASTSF RACILLSPNL QHPSDYRYQI TCCLRSKSVL
INDLECYPNS RSWYISGWDH RPLLTEHLFV FHGSLFKKRR WVEVDSDIQF EFSCDQEHYK
ITECGLQILA EEGERSSRER KEPSGEAVKV SKDENVFKTS KHTSWWRENV IHTPNMLHIP
FG
//
