ID A0A078HW06_BRANA Unreviewed; 540 AA.
AC A0A078HW06;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2067187.1};
DE SubName: Full=BnaC01g00570D protein {ECO:0000313|EMBL:CDY42645.1};
GN Name=BnaC01g00570D {ECO:0000313|EMBL:CDY42645.1};
GN ORFNames=DARMORV10_C01P00700.1 {ECO:0000313|EMBL:CAF2067187.1},
GN GSBRNA2T00075154001 {ECO:0000313|EMBL:CDY42645.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY42645.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY42645.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY42645.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2067187.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994365; CAF2067187.1; -; Genomic_DNA.
DR EMBL; LK032530; CDY42645.1; -; Genomic_DNA.
DR STRING; 3708.A0A078HW06; -.
DR PaxDb; 3708-A0A078HW06; -.
DR EnsemblPlants; CDY42645; CDY42645; GSBRNA2T00075154001.
DR Gramene; CDY42645; CDY42645; GSBRNA2T00075154001.
DR OMA; PQQPKDQ; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd12432; RRM_ACINU; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR InterPro; IPR034257; Acinus_RRM.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR032552; RSB_motif.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR PANTHER; PTHR47031; SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47031:SF3; SAP DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF16294; RSB_motif; 1.
DR Pfam; PF02037; SAP; 1.
DR SMART; SM00513; SAP; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR PROSITE; PS50800; SAP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 14..48
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT REGION 179..372
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 450..502
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 221..244
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 258..277
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 316..345
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 346..360
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 457..500
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 540 AA; 58599 MW; 3E10E123506312CE CRC64;
MSSSPFPVLD NRPIDKWKVT ELKEELKRRR LTTQGLKFDL VRRLDDALRA EQLESAVAAN
QQPDVTYVPA ANLAPDPTQT TPVPLVGGAA FSIGNAVVVT QEASNEQIVE MDNKETFSGL
DSKAQPTEVS AIHNQVSEVI PVTGFEVKSD CISTDCVSSN NGKIELKGNE IADNVKLEHS
LSKSQEPSTA IGESHPKISA RGGDDADMTK GNNNSVDAGD SEKLNLDRSS GDESMDDEPE
TKQNESVTSL EVVDKSVQND LLPDKADNMD GEKGEAPDNK SLPLVASDKR KLLVNDQEAV
GNNEPAKRQR RWNSGNIKVP EAQATNSVAP STTPRSAGPN RDFSRSDSSV SEDGPKERVV
PPSPKEPTNS LRIDRFLRPF TLKAVQELLG KTGNVTSFWM DTIKTHCYVS YGSVEEAAAT
REAVYNLQWP PNGGRLLIAE FVGPEEVKAK LEAPPPQQPK DQAPSQPPPT ALPPPPPLAK
APPVKERHAL PPPPPLVPEE QEAPIVTLDD LFKKTKAIPR IYYLPLSEEQ VAAKLAANNK
//
