ID A0A078HYV8_BRANA Unreviewed; 517 AA.
AC A0A078HYV8;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=BnaAnng06710D protein {ECO:0000313|EMBL:CDY42846.1};
GN Name=BnaAnng06710D {ECO:0000313|EMBL:CDY42846.1};
GN ORFNames=GSBRNA2T00075537001 {ECO:0000313|EMBL:CDY42846.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY42846.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY42846.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032536; CDY42846.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078HYV8; -.
DR STRING; 3708.A0A078HYV8; -.
DR PaxDb; 3708-A0A078HYV8; -.
DR EnsemblPlants; CDY42846; CDY42846; GSBRNA2T00075537001.
DR Gramene; CDY42846; CDY42846; GSBRNA2T00075537001.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0000118; C:histone deacetylase complex; IBA:GO_Central.
DR GO; GO:0004407; F:histone deacetylase activity; IBA:GO_Central.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 2.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR10625:SF29; HISTONE DEACETYLASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 2.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 29..222
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
FT DOMAIN 225..283
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
FT COILED 373..502
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 517 AA; 57916 MW; 27BE44C20C14C034 CRC64;
MAGESRKRKV GLLYDERMCK HDTPDGEDHP ECPNRIKAIW AKLQLTGLAQ RCVVLGGSKA
EDKHLQLVHT KEHVNLVKSL STKKKDSRRN KIASKLDSIY LNGGSSEAAY LAAGSVVEVA
EKVAEGELDC GFAIVRPPGH HAEADEAMGF YLAVKKILIV DWDVHHGNGT QKMFWKDPRV
LVFSVHRHDD GSFYPTGDDG DYDKVGEGAG EGFNINVPWE QGRRSGFDAA IGDPRGGCFV
TPYGYSVMLK KLMEFAQGKI VMALEGGYNL GSVAKSSLAC VQVLLEEKQI QDSFEEYPYE
STCRVIEAVR KRLCAYWPSL ADELPWEAKT PSSPTSSSSS DDGEEVLEST FIQERCIREA
KLTILSIRYK KQAESLRASL EVALEEKAAL QTKVAELQGE KLRLQDKYAA EAKEAAEKLT
HVSSELREAK IDLDFQRELF KKANEEKKLL EVRVLKLEAE LQQEASDKLR LRISRDRYAA
EVKEAAEHLA KVRSELRDVQ IDLNLHRKLP KKAKKVM
//
