ID A0A078I105_BRANA Unreviewed; 1160 AA.
AC A0A078I105;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=BnaA06g23080D protein {ECO:0000313|EMBL:CDY43772.1};
GN Name=BnaA06g23080D {ECO:0000313|EMBL:CDY43772.1};
GN ORFNames=GSBRNA2T00077271001 {ECO:0000313|EMBL:CDY43772.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY43772.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY43772.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032568; CDY43772.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078I105; -.
DR STRING; 3708.A0A078I105; -.
DR PaxDb; 3708-A0A078I105; -.
DR EnsemblPlants; CDY43772; CDY43772; GSBRNA2T00077271001.
DR Gramene; CDY43772; CDY43772; GSBRNA2T00077271001.
DR OMA; ENMINGA; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0015616; F:DNA translocase activity; IBA:GO_Central.
DR CDD; cd18001; DEXHc_ERCC6L; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45629:SF7; DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED; 1.
DR PANTHER; PTHR45629; SNF2/RAD54 FAMILY MEMBER; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 371..546
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 801..963
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 181..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 37..62
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 181..199
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1160 AA; 130741 MW; C3DDB81EADE193BB CRC64;
MADNTTSTRR KPQSLNDRHY RLLQDLSAPP KHAPSSSSTH EETKIKLAGR RRLCKASVKE
DVSEEDDDPD LADFDSPGKV DTPLERAGTG NKFTPWDEES KEAKTEVGDL PSFSMITDFG
SPSPHLEPKE ERHGGGGQNE IMDILDDLTS KLGTMSIKKK KDSQISDFES VKPSFSLISD
LSESSSKAGA DSLSDRQGNV GFSIPEEKAS NVFAGERGER VSHVGKQQPF PGQQHYVAKS
EGYRPDYNLD RGKGKLEEVD RSLKTTRHVE VSEKLRSVGR SNAARLRDLD DDDDDDCVVL
TGKKAAEMKI HLEKPTKPAR SHNTATHAYE EKVSEDEGSI TFTGPKSSYT LRGKIATILY
PHQREGLKWL WSLHIQEKGG ILGDDMGLGK TMQICSFLAG LFHSKLIKRA MIVAPKTLLP
HWMKELATVG LSQMTREYYG NSVKAREYDL NHILQGKGVL LTTYDIVRNN TKALQGYQLY
TDDDDEDDIK WDYMILDEGH LIKNPSTQRA KSLLEIPSSH RIIISGTPIQ NNLKELWALF
NFSCPGLLGD KKWFKDNYEH YILRGNDKDA SDRDKRIGST VAKQILKLVV FSRISTQAKE
HIQPFFLRRL KSEVFGDDAT TSRLSKKDEI VVWLRLTACQ RQIYEAFLNS EIVLSAFDGS
PLAALTLFFK NLGWLKSKSQ KLLTINLYIN VVSISDIYPF CLGYMLLGKM VSFLLCFNAS
NIYFCYKSCL FNIWELTLAI LKKICDHPLL LTKRAAEDVL EGMESTLTQE EAGVAERLAM
HIADNVDTDD FQTKNDSISC KLTFIMSLLE NLIPEGHRVL IFSQTRKMLN LIQDSLTSNG
YSFLRIDGTT KGLDRLKTVE EFQSGHVAPI FLLTSQVGGL GLTLTKADRV IVVDPAWNPS
TDNQSVDRAY RIGQTKDVIV YRLMTSATVE EKIYRKQVYK GGLFKTATEQ KEQIRYFSQQ
DLRELFSLPK GGFDVSPTQQ QLYEEHYNQI KLDETLESHV KFLETLGIAG VSHHSLLFSK
TAPIQPIQQD EVEEIRRITT SFVGGPSAKS SQENMINGAV YAFKPKDVNL DKRINISPID
ESEWSESEIK ARISRLSMLF QNKSMVASLP DRGAKIQKQI AELTRELEEI KAVKSNDMPH
QVIDLEDISQ KMHKGLNLLE
//
