ID A0A078I4M7_BRANA Unreviewed; 453 AA.
AC A0A078I4M7;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=BnaA02g14180D protein {ECO:0000313|EMBL:CDY45835.1};
GN Name=BnaA02g14180D {ECO:0000313|EMBL:CDY45835.1};
GN Synonyms=BnabHLH209 {ECO:0000313|EMBL:CAA8287494.1};
GN ORFNames=GSBRNA2T00082777001 {ECO:0000313|EMBL:CDY45835.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY45835.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY45835.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY45835.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAA8287494.1}
RP NUCLEOTIDE SEQUENCE.
RG Zhejiang university;
RL Submitted (JAN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; LR757265; CAA8287494.1; -; Genomic_DNA.
DR EMBL; LR758488; CAA8392105.1; -; Genomic_DNA.
DR EMBL; LR759447; CAA8403751.1; -; Genomic_DNA.
DR EMBL; LK032638; CDY45835.1; -; Genomic_DNA.
DR SMR; A0A078I4M7; -.
DR STRING; 3708.A0A078I4M7; -.
DR PaxDb; 3708-A0A078I4M7; -.
DR EnsemblPlants; CDY45835; CDY45835; GSBRNA2T00082777001.
DR Gramene; CDY45835; CDY45835; GSBRNA2T00082777001.
DR OMA; DQSHKTE; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR CDD; cd18919; bHLH_AtBPE_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR024097; bHLH_ZIP_TF.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR PANTHER; PTHR12565; STEROL REGULATORY ELEMENT-BINDING PROTEIN; 1.
DR PANTHER; PTHR12565:SF334; TRANSCRIPTION FACTOR BPE-RELATED; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 272..322
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 172..261
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 429..453
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 172..197
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 198..233
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 234..258
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 439..453
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 453 AA; 49344 MW; 99D26EB579FC0640 CRC64;
MDVNEKEEFS GEKRNTGYDS ADNHPSDWRI SGSNPVFAPP FGSYSTENLI TASCSPSQMM
DSFGQTLWYD PTNVQAVGYG GFSGGHPSSS SSSCLRGNMD RSLEMGWSMP NLMAQFPADS
GFIERAARFS LFSDMVNQPL GNPESVGLFL QGQCPSSEVN VGVATTAVRD PNVRSSELVS
KPNVSEDTRS SGQKGGETSS KDSKKRKRNR QNSEADQSHK TEEEAENNGD KKGSDEQSPN
SPGNKTNSGK QQGKQTSDPK DGYIHVRARR GQATNSHSLA ERVRREKISE RMKFLQDLVP
GCNKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPQM DFNLEALLAK DVRELQLRGG
SSSATPFPQN MSMVYPPLPH GFMQQTLSSM GRTISSPLSP MNGGYKRQET NGWEGDLQNV
IHINYGAGDV PSDPEAAATA TASLPSSNMK VEP
//
