ID A0A078IBF5_BRANA Unreviewed; 1093 AA.
AC A0A078IBF5;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=BnaA01g22970D protein {ECO:0000313|EMBL:CDY47171.1};
GN Name=BnaA01g22970D {ECO:0000313|EMBL:CDY47171.1};
GN ORFNames=GSBRNA2T00086867001 {ECO:0000313|EMBL:CDY47171.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY47171.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY47171.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; LK032701; CDY47171.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078IBF5; -.
DR STRING; 3708.A0A078IBF5; -.
DR PaxDb; 3708-A0A078IBF5; -.
DR EnsemblPlants; CDY47171; CDY47171; GSBRNA2T00086867001.
DR Gramene; CDY47171; CDY47171; GSBRNA2T00086867001.
DR OMA; CMTANNS; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0032301; C:MutSalpha complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0030983; F:mismatched DNA binding; IBA:GO_Central.
DR GO; GO:0006298; P:mismatch repair; IBA:GO_Central.
DR CDD; cd03286; ABC_MSH6_euk; 1.
DR Gene3D; 1.10.1420.10; -; 1.
DR Gene3D; 3.40.1170.10; DNA repair protein MutS, domain I; 1.
DR Gene3D; 3.30.420.110; MutS, connector domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR007695; DNA_mismatch_repair_MutS-lik_N.
DR InterPro; IPR000432; DNA_mismatch_repair_MutS_C.
DR InterPro; IPR007696; DNA_mismatch_repair_MutS_core.
DR InterPro; IPR016151; DNA_mismatch_repair_MutS_N.
DR InterPro; IPR036187; DNA_mismatch_repair_MutS_sf.
DR InterPro; IPR007860; DNA_mmatch_repair_MutS_con_dom.
DR InterPro; IPR036678; MutS_con_dom_sf.
DR InterPro; IPR045076; MutS_family.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11361:SF153; DNA MISMATCH REPAIR PROTEIN MSH7; 1.
DR PANTHER; PTHR11361; DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER; 1.
DR Pfam; PF01624; MutS_I; 1.
DR Pfam; PF05188; MutS_II; 1.
DR Pfam; PF05192; MutS_III; 1.
DR Pfam; PF00488; MutS_V; 1.
DR SMART; SM00534; MUTSac; 1.
DR SMART; SM00533; MUTSd; 1.
DR SUPFAM; SSF55271; DNA repair protein MutS, domain I; 1.
DR SUPFAM; SSF53150; DNA repair protein MutS, domain II; 1.
DR SUPFAM; SSF48334; DNA repair protein MutS, domain III; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00486; DNA_MISMATCH_REPAIR_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 922..938
FT /note="DNA mismatch repair proteins mutS family"
FT /evidence="ECO:0000259|PROSITE:PS00486"
FT REGION 1..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..25
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 55..72
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1093 AA; 120535 MW; 024C7590A7312585 CRC64;
MQRQKSILSF FQKPSQATQR SVPGDAATSG VGGLRSTAKE RGINSDASVR SVERNVPKPV
DDDVRGVDTP PEKVPRRVLP SNFKAAESAG GASSLFSSIM HKFVKVDGPP ECSGERNVAP
FRDSSVSKMP ESVFPTNNAQ PQDRDRTFCV YKPRLVEDDD VLGPDTPGTR PSVPRLKRVL
EDGVAFTENK ASLFDSNKRM KLFEDRICGE KKDVNEGTKF EWLEPSRIRD ANRRRPDDPL
YDRKTLYIPA DVFKKMSASQ KQYWSVKSEY MDVVLFFKVG KFYELYELDA ELGHKELDWK
MTMSGVGKCR QVGISESGID DAVQKLLARG YKVGRIEQLE TSDQAKARGA NTIIPRKLVQ
VLTPSTASEG NLGPDPVHLL AIKEVKMELE KCSTVYGFAF VDCASLRFWV GSISDDASCA
ALGALLMQVS PKEVIYESKG LSRESQQALR KYTLTGSTAV QLNPRPQEMG DADACGVRNM
IESSGYFRGS SESWNSAVDG LTESGIALSA LGELINHLSR LKLEDVLKNG DIHPYRVYSG
CLRIDGQTMV NLEIFNNSFD GGPSGKYNFF FIGTLYKFLD NCVSPTGKRL LRNWICHPLK
DIGSINKRLD VVEEFTANSE IMQITGQYLH KLPDLERLLG RIKSTVQSSA YLLPALLGKK
VLKQRVKSFG QLVKGFRSGI DLLLAVQKES NIIRLLCKLC KLPILEGKGG LELFLSQFEA
AIDSDFPDYQ NHDVTEENAE TLTILIDLFI EKAAECSEVI HTISCLDVLR SFAISASLSA
GSMARPVIFP ESKSTIQNQE TNGPTLKIQG LWHPFAVPAD GQLPVPNDLL LGEAGSSSIH
PRSLLLTGPN MGGKSTLLRA TCLAVIFAQL GCYVPCETCE LSLVDTIFTR LGASDRIMTG
ESTFLVECTE AASVLQNATQ DSLVILDELG RGTSTFDGYA IAYSVFRHMV ERVKCRMLFA
THYHPLTKEF SSHPRVTLKH MACAFKSRSD QEPGGCDQDL VFLYRLAEGA CPESYGLQVA
LMAGIPKQVV ETASVAAQAM KRSIGENFKS SELRSEFSSL HEEWLKTLVG ISQVVDDDKA
ISSISVARVK AMR
//
