ID A0A078IBX4_BRANA Unreviewed; 151 AA.
AC A0A078IBX4; A0A078BSX0;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=BnaA09g38730D protein {ECO:0000313|EMBL:CDY41142.1};
DE SubName: Full=BnaC04g22000D protein {ECO:0000313|EMBL:CDY48375.1};
GN Name=BnaC04g22000D {ECO:0000313|EMBL:CDY48375.1};
GN Synonyms=BnaA09g38730D {ECO:0000313|EMBL:CDY41142.1};
GN ORFNames=GSBRNA2T00072538001 {ECO:0000313|EMBL:CDY41142.1},
GN GSBRNA2T00089366001 {ECO:0000313|EMBL:CDY48375.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY48375.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY48375.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY48375.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS15 family.
CC {ECO:0000256|ARBA:ARBA00008434, ECO:0000256|RuleBase:RU003919}.
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DR EMBL; LK032492; CDY41142.1; -; Genomic_DNA.
DR EMBL; LK032768; CDY48375.1; -; Genomic_DNA.
DR RefSeq; XP_013648240.1; XM_013792786.1.
DR RefSeq; XP_013648417.1; XM_013792963.1.
DR RefSeq; XP_013688076.1; XM_013832622.1.
DR RefSeq; XP_013708217.1; XM_013852763.1.
DR RefSeq; XP_013708327.1; XM_013852873.1.
DR RefSeq; XP_013741983.1; XM_013886529.1.
DR RefSeq; XP_013750187.1; XM_013894733.1.
DR STRING; 3708.A0A078IBX4; -.
DR PaxDb; 3708-A0A078IBX4; -.
DR EnsemblPlants; CDX67841; CDX67841; GSBRNA2T00099038001.
DR EnsemblPlants; CDY41142; CDY41142; GSBRNA2T00072538001.
DR EnsemblPlants; CDY48375; CDY48375; GSBRNA2T00089366001.
DR GeneID; 106353110; -.
DR GeneID; 106411904; -.
DR GeneID; 106412000; -.
DR GeneID; 106445047; -.
DR GeneID; 106452584; -.
DR Gramene; CDX67841; CDX67841; GSBRNA2T00099038001.
DR Gramene; CDY41142; CDY41142; GSBRNA2T00072538001.
DR Gramene; CDY48375; CDY48375; GSBRNA2T00089366001.
DR KEGG; bna:106353110; -.
DR KEGG; bna:106411904; -.
DR KEGG; bna:106412000; -.
DR KEGG; bna:106445047; -.
DR KEGG; bna:106452584; -.
DR OMA; CCPTAIA; -.
DR OrthoDB; 5188951at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0070181; F:small ribosomal subunit rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00353; Ribosomal_S15p_S13e; 1.
DR Gene3D; 4.10.860.130; -; 1.
DR Gene3D; 1.10.287.10; S15/NS1, RNA-binding; 1.
DR HAMAP; MF_01343_A; Ribosomal_S15_A; 1.
DR InterPro; IPR000589; Ribosomal_uS15.
DR InterPro; IPR023029; Ribosomal_uS15_arc_euk.
DR InterPro; IPR012606; Ribosomal_uS15_N.
DR InterPro; IPR009068; uS15_NS1_RNA-bd_sf.
DR PANTHER; PTHR11885:SF25; 40S RIBOSOMAL PROTEIN S13-1-RELATED; 1.
DR PANTHER; PTHR11885; RIBOSOMAL PROTEIN S15P/S13E; 1.
DR Pfam; PF08069; Ribosomal_S13_N; 1.
DR Pfam; PF00312; Ribosomal_S15; 1.
DR SMART; SM01386; Ribosomal_S13_N; 1.
DR SMART; SM01387; Ribosomal_S15; 1.
DR SUPFAM; SSF47060; S15/NS1 RNA-binding domain; 1.
DR PROSITE; PS00362; RIBOSOMAL_S15; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|RuleBase:RU003919};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000256|RuleBase:RU003919}.
FT DOMAIN 1..60
FT /note="Small ribosomal subunit protein uS15 N-terminal"
FT /evidence="ECO:0000259|SMART:SM01386"
SQ SEQUENCE 151 AA; 17076 MW; FCC445A74547ABAD CRC64;
MGRLHSKGKG ISASALPYKR SPPSWLKTTS QDVDESICKF AKKGLTPSQI GVILRDSHGI
PQVKSVTGNK ILRILKAHGL APEIPEDLYH LIKKAVAIRK HLERNRKDKD SKFRLILVES
RIHRLARYYK KTKKLPPVWK YESTTASTLV A
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