ID A0A078IFV2_BRANA Unreviewed; 1283 AA.
AC A0A078IFV2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=BnaC02g47380D protein {ECO:0000313|EMBL:CDY49780.1};
GN Name=BnaC02g47380D {ECO:0000313|EMBL:CDY49780.1};
GN ORFNames=GSBRNA2T00093797001 {ECO:0000313|EMBL:CDY49780.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY49780.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY49780.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032858; CDY49780.1; -; Genomic_DNA.
DR PaxDb; 3708-A0A078IFV2; -.
DR EnsemblPlants; CDY49780; CDY49780; GSBRNA2T00093797001.
DR Gramene; CDY49780; CDY49780; GSBRNA2T00093797001.
DR OMA; MLLHAYS; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR011713; Leu-rich_rpt_3.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11017:SF382; TIR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF07725; LRR_3; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF01582; TIR; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 1261..1279
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 4..167
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
FT REGION 1197..1238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1197..1212
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1283 AA; 144779 MW; 0E6D351C085D7F06 CRC64;
MAKTGHQVFI SFRGADVRKN FLSFLTDGLK RACVNYYVDT KETKGEVLDI LLQRIQESRL
VLIILSENYM QSNWCIKELR TTTKDITESR RKVIPIFYNV QVADVKDKWK VGEQAEGVEG
EETVEEREKN VKEALMILTR HMGMRSDEYG TDCEFIEHIV KEVKKVLTSI EQEEKVKASV
NTTVRSEGEK QEVSSLTGTN LQEKEKSLRQ RKMLILGMAG IGKTTIAHKL FEEGKNKFHR
RMFFDDIDKT SKEEGLTELR VRLLRKLLKK TDKTITEETT HESVETELLD SNVFLVLDNV
SNKKQLEHLL GNRRWISQGS KVVIVTSDKS LVEDVVSDTY VVPGLNEKEG LECFCYHAFG
DHKVHEGSFM KQSREFVDYA RGNPLALKVL GPELRGRDTA HWESKLLQLA QSPSNVLNVS
YDGLSQQQKE AFLDVTCFFR SENHRFVTAL VDSEPDKGSS EIRDLADKFL IDITGGRVEM
HNLLYTLGKK LASKQQKRLR NHHEIIRALK KKMGKSTING IRGMFLDMSE VGTDTALSKE
AFNGMDNLRY LKIYDSHFPQ ENEAGYKLHF SNGVKLPLQK IRYLHWLRFP GEELPQDFNP
KNLIDLKLPY SKIKRLWDGV KDTSKLTWVD LSHSVNLSYL SGLLGSQNLR RLNLEGCKEL
KTLDARMENL TSLVLLNLRG CSSLVSLTEM NMESLKTLIL SDCSNLEEFQ IISEQLEALY
LDGTSIKTLP PSMIKLQKLV LLNLKDCTKL ATVPGCLGNM KALQEVILSG CKKMETFPDL
QENMRRLRIF LLDGTSIKEV PKRLQNPGLS RWPHHGGVKG FPLLRHLSLR GNDKIQSLQP
DIGDLYHLKY IDLKFCKNLA SVPTLPPNLQ CLNAHGCESL TTLGNPLAHL VLTDQIHATL
IFSNCNKLDE DAKTGIISYI QKKSQLMSDA IDRYNLGSVV ESFVGACFPG CEVHASLSHQ
AYGSVIVLPE LSRHWSNNGT TGVVLCAVVS FTDYQDQNNH VLVKCTCEFK TSDGSLRQFS
CMVGGNRPRT INSDHVFVGY TSWLQIKKQK EADDDDDKKD YSCSDDDQAS LRFEVIDSTR
ELVKNCQVIK CGFSFVNESD EAESFSWEVN RIHGEASEME VINQQGETST VSNNSTQGVL
ASRIIDNEEA LRSQQRETRS IGNNNNDTNG ALMLLHAYSD DSELTDGDES QRMKEINQQG
DTISIGDVSM VSQDSEESDE SEINEQDETN SCVSSDDQGN SYVQECGRVT ENTSAQMIKP
VGLLCLMISI SAGAAFILGK RKR
//
