ID A0A078II44_BRANA Unreviewed; 501 AA.
AC A0A078II44;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1782272.1};
DE SubName: Full=BnaC09g41240D protein {ECO:0000313|EMBL:CDY49646.1};
GN Name=BnaC09g41240D {ECO:0000313|EMBL:CDY49646.1};
GN ORFNames=DARMORV10_C09P60480.1 {ECO:0000313|EMBL:CAF1782272.1},
GN GSBRNA2T00093514001 {ECO:0000313|EMBL:CDY49646.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY49646.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY49646.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY49646.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1782272.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; HG994373; CAF1782272.1; -; Genomic_DNA.
DR EMBL; LK032850; CDY49646.1; -; Genomic_DNA.
DR RefSeq; XP_013728454.1; XM_013873000.1.
DR STRING; 3708.A0A078II44; -.
DR PaxDb; 3708-A0A078II44; -.
DR EnsemblPlants; CDY49646; CDY49646; GSBRNA2T00093514001.
DR GeneID; 106432155; -.
DR Gramene; CDY49646; CDY49646; GSBRNA2T00093514001.
DR KEGG; bna:106432155; -.
DR OMA; SQMPVAR; -.
DR OrthoDB; 463517at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 11.
DR PANTHER; PTHR47941:SF35; PENTATRICOPEPTIDE (PPR) REPEAT PROTEIN; 1.
DR PANTHER; PTHR47941; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 11.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 114..148
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 149..183
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 184..214
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 217..251
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 252..286
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 287..321
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 322..356
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 357..391
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 392..426
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 427..461
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 462..496
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..48
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 501 AA; 56335 MW; ACC71FB8524A7D5D CRC64;
MRRSISSKAK SFLHRNLPEK ANPPSYAISD SPRRAHTSSS NNNNTDYKET LRSNKLRHMN
LDDSLELFFH MIQRHPFPSI ADFSRLLTAI SKLNSHDVVI HLWEQMEILG VAHNLYTCNI
LVNCLCRCSE LSQALSFLAK MIKLGHSPSV VTFGSLIGGF CRGGRVSEAL RLFNRMVEIG
VRPNVVICNI VIDGLCKSRH VDKALDFFNQ MEVVRPDVIT YNSLISGLCN ASRWGEALRM
VRCMSESGLS PDVFTFNALI DACVKRGSLS EAEELYEEMV RRSLEPDVVT YSLLIGGLCM
CSRLDEAERM FEYMVSRRCF PDVVTYSILI NGFCKSRKVD YGMKLFCEMS RRGVVRNVVT
YTILIQGYCL AGKVNVAEEI FKRMAGSGVS PNIVTCNVLL HGLCDNGKVE KALVMLEDME
KSGMEGDIVT YNIIIRGMCK AGEVADAWGL YCSLNLKGLV PDIWTYTTMM LGLYKKGLRR
EADALFRKMK EDGILPNECC V
//
