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Database: UniProt
Entry: A0A078IJE5_BRANA
LinkDB: A0A078IJE5_BRANA
Original site: A0A078IJE5_BRANA 
ID   A0A078IJE5_BRANA        Unreviewed;       351 AA.
AC   A0A078IJE5;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   RecName: Full=UDP-glucose 4-epimerase {ECO:0000256|RuleBase:RU366046};
DE            EC=5.1.3.- {ECO:0000256|RuleBase:RU366046};
GN   Name=BnaA09g10850D {ECO:0000313|EMBL:CDY49193.1};
GN   ORFNames=DARMORV10_A09P13510.1 {ECO:0000313|EMBL:CAF2039031.1},
GN   GSBRNA2T00092555001 {ECO:0000313|EMBL:CDY49193.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY49193.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY49193.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA   Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA   Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA   Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA   Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA   Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA   Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA   Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA   Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA   Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA   Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA   Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA   Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
RN   [2] {ECO:0000313|EMBL:CDY49193.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Genoscope - CEA;
RL   Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:CAF2039031.1}
RP   NUCLEOTIDE SEQUENCE.
RG   Genoscope - CEA;
RA   William W.;
RL   Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=NAD(+); Xref=ChEBI:CHEBI:57540;
CC         Evidence={ECO:0000256|ARBA:ARBA00001911,
CC         ECO:0000256|RuleBase:RU366046};
CC   -!- PATHWAY: Carbohydrate metabolism; galactose metabolism.
CC       {ECO:0000256|RuleBase:RU366046}.
CC   -!- SIMILARITY: Belongs to the NAD(P)-dependent epimerase/dehydratase
CC       family. {ECO:0000256|ARBA:ARBA00007637, ECO:0000256|RuleBase:RU366046}.
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DR   EMBL; HG994363; CAF2039031.1; -; Genomic_DNA.
DR   EMBL; LK032817; CDY49193.1; -; Genomic_DNA.
DR   STRING; 3708.A0A078IJE5; -.
DR   PaxDb; 3708-A0A078IJE5; -.
DR   EnsemblPlants; CDY49193; CDY49193; GSBRNA2T00092555001.
DR   Gramene; CDY49193; CDY49193; GSBRNA2T00092555001.
DR   OMA; YNINGTM; -.
DR   UniPathway; UPA00214; -.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0003978; F:UDP-glucose 4-epimerase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006012; P:galactose metabolic process; IEA:UniProtKB-UniPathway.
DR   GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR   CDD; cd05247; UDP_G4E_1_SDR_e; 1.
DR   Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR   Gene3D; 3.90.25.10; UDP-galactose 4-epimerase, domain 1; 1.
DR   InterPro; IPR016040; NAD(P)-bd_dom.
DR   InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR   InterPro; IPR005886; UDP_G4E.
DR   NCBIfam; TIGR01179; galE; 1.
DR   PANTHER; PTHR43725:SF24; BIFUNCTIONAL UDP-GLUCOSE 4-EPIMERASE AND UDP-XYLOSE 4-EPIMERASE 3; 1.
DR   PANTHER; PTHR43725; UDP-GLUCOSE 4-EPIMERASE; 1.
DR   Pfam; PF16363; GDP_Man_Dehyd; 1.
DR   SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
PE   3: Inferred from homology;
KW   Carbohydrate metabolism {ECO:0000256|RuleBase:RU366046};
KW   Isomerase {ECO:0000256|RuleBase:RU366046};
KW   NAD {ECO:0000256|RuleBase:RU366046};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT   DOMAIN          10..335
FT                   /note="NAD(P)-binding"
FT                   /evidence="ECO:0000259|Pfam:PF16363"
SQ   SEQUENCE   351 AA;  39001 MW;  ED3982D61F4B0AF9 CRC64;
     MGSSVEQCIL VTGGAGFIGT HTVVQLLNQG FKVSIIDNLD NSVHEAVHRV RELVGPDLSS
     KLEFNLGDLR NKGDIEKLFS NQRFDAVIHF AGLKAVGESV ANPRRYFDNN LVGTINLYET
     MAKYNCKMMV FSSSATVYGQ PEVVPCVEDF ELQAMNPYGR TKLYLEEIAR DIQAAEPEWR
     IILLRYFNPV GAHESGRIGE DPKGIPNNLM PYIQQVAVGR LPELNVFGHD YPTPDGSAVR
     DYIHVMDLAD GHVAALNKLF TDPKIGCTAY NLGTGQGTSV LEMVSAFEKA SGKKIPMKLC
     PRRAGDATAV YASTERAEKE LGWKAKYGVD EMCRDQWNWA NNNPWGFHEK H
//
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