ID A0A078IJY7_BRANA Unreviewed; 572 AA.
AC A0A078IJY7;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2132899.1};
DE SubName: Full=BnaA03g50670D protein {ECO:0000313|EMBL:CDY49378.1};
GN Name=BnaA03g50670D {ECO:0000313|EMBL:CDY49378.1};
GN ORFNames=DARMORV10_A03P62350.1 {ECO:0000313|EMBL:CAF2132899.1},
GN GSBRNA2T00092926001 {ECO:0000313|EMBL:CDY49378.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY49378.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY49378.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY49378.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2132899.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 10 (cellulase F) family.
CC {ECO:0000256|ARBA:ARBA00007495}.
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DR EMBL; HG994357; CAF2132899.1; -; Genomic_DNA.
DR EMBL; LK032828; CDY49378.1; -; Genomic_DNA.
DR STRING; 3708.A0A078IJY7; -.
DR PaxDb; 3708-A0A078IJY7; -.
DR EnsemblPlants; CDY49378; CDY49378; GSBRNA2T00092926001.
DR Gramene; CDY49378; CDY49378; GSBRNA2T00092926001.
DR OMA; DWKSEAN; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0031176; F:endo-1,4-beta-xylanase activity; IEA:UniProt.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR044846; GH10.
DR InterPro; IPR001000; GH10_dom.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR31490; GLYCOSYL HYDROLASE; 1.
DR PANTHER; PTHR31490:SF2; GLYCOSYL HYDROLASE FAMILY 10 PROTEIN; 1.
DR Pfam; PF00331; Glyco_hydro_10; 1.
DR SMART; SM00633; Glyco_10; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR PROSITE; PS51760; GH10_2; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Polysaccharide degradation {ECO:0000256|ARBA:ARBA00023326};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 213..509
FT /note="GH10"
FT /evidence="ECO:0000259|PROSITE:PS51760"
SQ SEQUENCE 572 AA; 64592 MW; 2447CE116C17C199 CRC64;
MLCLFKIYCK CFILINYPKF EMIPNYFHNE ASSTAASLLQ PFSIKLFSIL SLCLENPYKP
QYNGGIIVNP DLQNGSQGWA QFANAKVDFR EFGGNKFVVA RGRNQSYDSV SQKIYLEKEL
LYTFSAWLQV SKGKAPVIAV FKKNGGLTID ESGPAELYFE SEDTTVEIWV DSVSLQPFTQ
EEWNAHHEQT IHRTRKRGMR IRAVNSLGEP IPSATISIVQ NRLGFSFGCE VEKYILVNQA
YQNWFTKRFT VTTFANEMKW YSTEAVRGKE DYTTADAMLR FFKQHGIAVR GHNIVWNDPK
YQLSWVSSLS GNDLYNAVKR RVSSVVSRYK GQLLSWDVVN ENLHFSFFES KMGPQASYNI
FALAHSIDPR TPMFMNEFNT LEQPGDSASS PARYLGKLRE LQSIRVAGNI QLGIGLESHF
NTPNIPYMRS ALDTLAATGL PIWLTEVDVQ APPNVQAKYF EQVLREGHAH PQVKGMVTWS
GYSPSGCYKM CLTDGNFRNL PTGDVVDKLL REWGGLRGQT TGLTDADGFF EASLFHGDYD
ISIAHPLTNS TASHSFKLTS DDSQPSRFVV HV
//
