ID A0A078IME9_BRANA Unreviewed; 642 AA.
AC A0A078IME9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1934822.1};
DE SubName: Full=BnaC05g52040D protein {ECO:0000313|EMBL:CDY52260.1};
GN Name=BnaC05g52040D {ECO:0000313|EMBL:CDY52260.1};
GN ORFNames=DARMORV10_C05P53560.1 {ECO:0000313|EMBL:CAF1934822.1},
GN GSBRNA2T00005247001 {ECO:0000313|EMBL:CDY52260.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY52260.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY52260.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY52260.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1934822.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19)
CC family. Cation/calcium exchanger (CCX) subfamily.
CC {ECO:0000256|ARBA:ARBA00038187}.
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DR EMBL; HG994369; CAF1934822.1; -; Genomic_DNA.
DR EMBL; LK033072; CDY52260.1; -; Genomic_DNA.
DR RefSeq; XP_013749770.1; XM_013894316.1.
DR STRING; 3708.A0A078IME9; -.
DR PaxDb; 3708-A0A078IME9; -.
DR EnsemblPlants; CDY52260; CDY52260; GSBRNA2T00005247001.
DR GeneID; 106452254; -.
DR Gramene; CDY52260; CDY52260; GSBRNA2T00005247001.
DR KEGG; bna:106452254; -.
DR OMA; YPFTFLI; -.
DR OrthoDB; 3087817at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0008324; F:monoatomic cation transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0006812; P:monoatomic cation transport; IBA:GO_Central.
DR Gene3D; 1.20.1420.30; NCX, central ion-binding region; 2.
DR InterPro; IPR004837; NaCa_Exmemb.
DR InterPro; IPR044880; NCX_ion-bd_dom_sf.
DR PANTHER; PTHR12266:SF0; MITOCHONDRIAL SODIUM_CALCIUM EXCHANGER PROTEIN; 1.
DR PANTHER; PTHR12266; NA+/CA2+ K+ INDEPENDENT EXCHANGER; 1.
DR Pfam; PF01699; Na_Ca_ex; 2.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 14..31
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 132..150
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 209..228
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 240..261
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 267..288
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 415..432
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 444..462
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 474..492
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 543..566
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 586..604
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 616..641
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 139..282
FT /note="Sodium/calcium exchanger membrane region"
FT /evidence="ECO:0000259|Pfam:PF01699"
FT DOMAIN 479..631
FT /note="Sodium/calcium exchanger membrane region"
FT /evidence="ECO:0000259|Pfam:PF01699"
SQ SEQUENCE 642 AA; 70326 MW; 6AB00B30E4BF0891 CRC64;
MNAVNFLYTK NPKFRGIFNG LCALILFFFF FDRSEILKNP LLKKASFVSK GKLNTNGFTQ
FTLVRRHMIE EDVSKFGNDT LSSTSTVLCS GLHNHIGYAD QCDFLKANPS CSPDGFFDYL
SFFYCSCRDF KILGYMILGV WLVALFYLLG NTAADYFCCS LEKLSKLLRL PPTLAGVTLL
PLGNGAPDVF ASIAAFVGSD KGEVGLNSVL GGAVFVTSVV VGIVSLCVAD MEVKLDKKCF
IRDLSFFLFS LVSLMVILMV GEVTVRIAVA FVSIYVVYAF LVAANVILRK HAKRFKIEAI
TPLLPMQGSV FSPSVGEDVP IHSPLIESDS EDGPPRLLNS LPQWMWASNV AIYSNHFARG
SSVQDDDRPP WGWIEDGAEA ESSFCNKFTS LLEIPLTVPR KLTIPSVEED TWSKTYAVAS
VTLAPLLLAS LWSSQDNVSP QACGVAYFIS LAIGSTLGFL AYKNTEPDHP PRRFLIPWVL
GGFIMSIVWF YMIANELVAL LVTFGEIYGI NPSILALTVL AWGNSMGDLV SNIALSMNGG
DGVQIALSGC YAGPMFNTLV GLGMSMLLGA WSKSPDTYMV PEDKSLFYTL GFLVLGLVWA
MVMLPRNDMQ PNKTLGIGLI ALYLIFVTFR LSCAMGFIPW AA
//
