ID A0A078ING1_BRANA Unreviewed; 525 AA.
AC A0A078ING1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1920821.1};
DE SubName: Full=BnaC02g39570D protein {ECO:0000313|EMBL:CDY50583.1};
GN Name=BnaC02g39570D {ECO:0000313|EMBL:CDY50583.1};
GN ORFNames=DARMORV10_C02P57850.1 {ECO:0000313|EMBL:CAF1920821.1},
GN GSBRNA2T00097033001 {ECO:0000313|EMBL:CDY50583.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY50583.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY50583.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY50583.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1920821.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the NOP5/NOP56 family.
CC {ECO:0000256|ARBA:ARBA00009211}.
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DR EMBL; HG994366; CAF1920821.1; -; Genomic_DNA.
DR EMBL; LK032924; CDY50583.1; -; Genomic_DNA.
DR STRING; 3708.A0A078ING1; -.
DR PaxDb; 3708-A0A078ING1; -.
DR EnsemblPlants; CDY50583; CDY50583; GSBRNA2T00097033001.
DR Gramene; CDY50583; CDY50583; GSBRNA2T00097033001.
DR OMA; PAETYNT; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0031428; C:box C/D RNP complex; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0030515; F:snoRNA binding; IBA:GO_Central.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.287.4070; -; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR045056; Nop56/Nop58.
DR InterPro; IPR012974; NOP58/56_N.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR PANTHER; PTHR10894:SF25; NOP DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10894; NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58; 1.
DR Pfam; PF01798; Nop; 1.
DR Pfam; PF08156; NOP5NT; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 270..388
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT REGION 442..525
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 442..470
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 478..514
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 525 AA; 57951 MW; 23B03DCC387E2284 CRC64;
MSLYRPLSYL YQWPALDLGN VFSSPESARK MVKLKAFDKF DNTSDALEAV AKLVEGTPSK
GLRKFLKANC KGETLAVADS KLGNIIKEKL TIDCVHNNAV MELLRGVRSQ LSELITGLGE
QDLAPMSLGL SHSLARYKLK FSSDKVDTMI IQAIGLLDDL DKELNTYAMR VREWYGWHFP
ELAKIISDNI LYAKSVKLMG NRINAAKLDF SEILADEVEA ELKEASVISM GTEVSDLDLI
HIRELCDQVL SLAEYRAQLY DYLKSRMNTI APNLTALVGE LVGARLISHG GSLLNLAKQP
GSTVQILGAE KALFRALKTK HNTPKYGLIF HASVVGQAGG KNKPRIARSL AAKAALSIRC
DALGDAGDNS MGVENRLKLE ARLRSLEGKD LGRLAGSAKG KPKIEVYNKD KKMGSGGLIA
PAETYNTAAD SLLVQTTVSA ENGVKEKKDK KKKKKAEAEE EEEAKAEESS KKKKKKKAKT
EVEPEVVEPA KKEKKKKKRK HEEEETEEPA KKKEKKEKKK KKSEA
//
