ID A0A078ISV1_BRANA Unreviewed; 466 AA.
AC A0A078ISV1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1704978.1};
DE SubName: Full=BnaCnng23800D protein {ECO:0000313|EMBL:CDY52901.1};
GN Name=BnaCnng23800D {ECO:0000313|EMBL:CDY52901.1};
GN ORFNames=DARMORV10_C03P49480.1 {ECO:0000313|EMBL:CAF1704978.1},
GN GSBRNA2T00008074001 {ECO:0000313|EMBL:CDY52901.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY52901.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY52901.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY52901.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1704978.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR EMBL; HG994367; CAF1704978.1; -; Genomic_DNA.
DR EMBL; LK033140; CDY52901.1; -; Genomic_DNA.
DR RefSeq; XP_013655205.1; XM_013799751.1.
DR RefSeq; XP_013655269.1; XM_013799815.1.
DR STRING; 3708.A0A078ISV1; -.
DR PaxDb; 3708-A0A078ISV1; -.
DR EnsemblPlants; CDY52901; CDY52901; GSBRNA2T00008074001.
DR GeneID; 106360127; -.
DR Gramene; CDY52901; CDY52901; GSBRNA2T00008074001.
DR KEGG; bna:106360127; -.
DR OMA; VESVKWF; -.
DR OrthoDB; 124800at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR InterPro; IPR001876; Znf_RanBP2.
DR PANTHER; PTHR10625:SF16; HISTONE DEACETYLASE 15; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 75..94
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS01358"
FT COILED 421..465
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 466 AA; 51297 MW; E84ABED5D623D30D CRC64;
MVVESLESSC EVSKRKHGDG GDGIRILLDE FSNGDVNSVS SVSSKRAKVS REMTFQEDSD
WEPMQQTKPV ESVKWFCVNC TMPNPGDMVH CYMCGEHKES GILSHGCFAS PFCKDNGLTQ
VEEKRGGSSP STSSTAVGFD ERMWLHSEFE VKELPHVERP DRLPAIAASL ATAGVFPGRC
FPIHAREITK QELQMVHTSE HVDAVDTTSQ LQHSYFTSDT YANEYSARAA RLAAGLCADL
AKEIFSGRVK NGFALVRPPG HHAGIKDAMG FCLHNNAAVA ALVAQAAGAR KVLIVDWDVH
HGNGTQEIFE KNKSVMYISL HRHEGGKFYP GTGAANERHM REAVVTQGAV DAEAVVVDEA
PPSEFAFNFS YSGDGSLLDD KEACGELFRL FRLEPDPSRD LSPPDETNLY NEYALSVARS
IASVNAMVAE YENALRTARA DLEEQKKELE EMASLRRELE EERKSA
//
