ID A0A078ITZ4_BRANA Unreviewed; 896 AA.
AC A0A078ITZ4;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=1,4-alpha-glucan branching enzyme {ECO:0000256|ARBA:ARBA00012541};
DE EC=2.4.1.18 {ECO:0000256|ARBA:ARBA00012541};
GN Name=BnaA05g36120D {ECO:0000313|EMBL:CDY54647.1};
GN ORFNames=DARMORV10_A05P28460.1 {ECO:0000313|EMBL:CAF2099806.1},
GN GSBRNA2T00014452001 {ECO:0000313|EMBL:CDY54647.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY54647.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY54647.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY54647.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2099806.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Transfers a segment of a (1->4)-alpha-D-glucan chain to a
CC primary hydroxy group in a similar glucan chain.; EC=2.4.1.18;
CC Evidence={ECO:0000256|ARBA:ARBA00000826};
CC -!- PATHWAY: Glycan biosynthesis; starch biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004727}.
CC -!- SUBUNIT: Monomer. {ECO:0000256|ARBA:ARBA00011245}.
CC -!- SUBCELLULAR LOCATION: Plastid, amyloplast
CC {ECO:0000256|ARBA:ARBA00004602}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family. GlgB
CC subfamily. {ECO:0000256|ARBA:ARBA00009000}.
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DR EMBL; HG994359; CAF2099806.1; -; Genomic_DNA.
DR EMBL; LK033339; CDY54647.1; -; Genomic_DNA.
DR STRING; 3708.A0A078ITZ4; -.
DR PaxDb; 3708-A0A078ITZ4; -.
DR EnsemblPlants; CDY54647; CDY54647; GSBRNA2T00014452001.
DR Gramene; CDY54647; CDY54647; GSBRNA2T00014452001.
DR OMA; AYWTETR; -.
DR OrthoDB; 349883at2759; -.
DR UniPathway; UPA00152; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0009501; C:amyloplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003844; F:1,4-alpha-glucan branching enzyme activity; IBA:GO_Central.
DR GO; GO:0102752; F:1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis); IEA:UniProtKB-EC.
DR GO; GO:0043169; F:cation binding; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IBA:GO_Central.
DR GO; GO:0005978; P:glycogen biosynthetic process; IEA:InterPro.
DR GO; GO:0019252; P:starch biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR InterPro; IPR006048; A-amylase/branching_C.
DR InterPro; IPR037439; Branching_enzy.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR PANTHER; PTHR43651; 1,4-ALPHA-GLUCAN-BRANCHING ENZYME; 1.
DR PANTHER; PTHR43651:SF4; 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 3, CHLOROPLASTIC_AMYLOPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02806; Alpha-amylase_C; 1.
DR PIRSF; PIRSF000463; GlgB; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Amyloplast {ECO:0000256|ARBA:ARBA00023234};
KW Plastid {ECO:0000256|ARBA:ARBA00023234};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 412..760
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 47..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 896 AA; 103090 MW; B16A075C22EEA02A CRC64;
MVSLSNQTSF SFYPNNLFVS DKTRLGIPGI NFPRKIKVKV TCFAADQPRQ QKQQKKKKSQ
STNSDADSGV DPVGFLTKLG IADRIFAQFL RERHKAIKDL KDELLKRHFD LRDLASGFEL
LGMHRHMEHR VDFIDWGPGA RYGAIIGDFN GWSPTENSAR EGLFGHDDFG YWFIILEDKL
REGEEPEELY FQQYNYVDDY DKGDSGVTAE EVFQRANDEY WEPGEDRFIK NRYEVPAKLY
EQLFGPNSPQ TLEDLGEIPD AETRYKQYKE EHKNDPPSNL PPCDIIDDGR GKPYDVYNVV
TSPEWTKKFY EKSPPIPYWL ETRKGRKAWL EKYIPAVPHG SKYRLYFNTP DGPLERVPAW
ATYVQPEDEG KQAYAIHWEP SPESAYKWKH SKPDKPKSLR IYECHVGISG SEAKISSFED
FTKKVLPHVK RAGYNAIQLI GIPEHKDYYT VGYRVTNFFA VSSRYGTPDD FKRLVDEAHG
LGLLVFLDIV QSYAAADQMV GLSLFDGSND CYFHHGKRGH HKHWGTRMFK YGDLDVFHFL
ISNLNWWITE YQVDGYQFHS LASMIYTHNG FAPFNSGFDD YCNQYVDRDA LMYLILANEI
LHDLHPDIIT IAEDATYYPG LCEPVSQGGL GFDYYVNLSA TEMWVSLLDT VPDSEWSMSK
IVSTLVANKE YVDKMLSYAE SHNQSISGGR SFAEILFGGV QNKIKLLDRG VSLHKMIRLL
TFTIGGRAYL NFMGNEFGHP ERVEFPTQSN KFSFSLANRR WDLLESGIHH QLFSFDKDLM
DLDKSKGILS RGLPSIHHVN DANMVISFSR GPFLFIFNFH PSNSYEKYGV GVEEAGEYTM
ILNSDEAKYG GQGLLKEDQY LQRSISKRID GQRNCLEVFL PSRTAQVYKL TRILRI
//
