ID A0A078IVD2_BRANA Unreviewed; 762 AA.
AC A0A078IVD2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2175509.1};
DE SubName: Full=BnaA07g38240D protein {ECO:0000313|EMBL:CDY53916.1};
GN Name=BnaA07g38240D {ECO:0000313|EMBL:CDY53916.1};
GN ORFNames=DARMORV10_A07P25540.1 {ECO:0000313|EMBL:CAF2175509.1},
GN GSBRNA2T00011686001 {ECO:0000313|EMBL:CDY53916.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY53916.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY53916.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY53916.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2175509.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; HG994361; CAF2175509.1; -; Genomic_DNA.
DR EMBL; LK033249; CDY53916.1; -; Genomic_DNA.
DR PaxDb; 3708-A0A078IVD2; -.
DR EnsemblPlants; CDY53916; CDY53916; GSBRNA2T00011686001.
DR Gramene; CDY53916; CDY53916; GSBRNA2T00011686001.
DR OMA; FVQGYEV; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 11.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF366; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR DMR1; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 5.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 11.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 182..216
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 327..361
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 368..403
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 404..438
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 439..473
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 474..508
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 509..543
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 544..578
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 579..613
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 614..648
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 650..684
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 762 AA; 85841 MW; 4FF3EBDF7C1F4032 CRC64;
MNTLLSLSRR RNSYYLLNHP RLLRRFSADA DPPPGIKPES HESVEARLLE NLRKIPHHDW
ASSETLSSLL ATSLPPPAFS QITRRLGSYS LAVSFLSYLD AKSQSLNRRE ESLSLVFQSA
IEFAGSEPDA KDKLLRLYET ATEKNIPLTV VATKLLIRWF SRMGMVNQSV LVYERLDSGV
KNTQVRNVVI DVLFRNKRVD DAFKVLDEML CKGSVFRPNR ITADIVFHEV WRGRVLKEEE
IVGLISRFGS HGVAPNCVWL TRFITSLCRN ARTDVAWEVL SGLMKNRAAP LQAPSFNALL
TVLGRNMEIG RMNDVVVKMD EMKIRPDVVT LGILINTLCK SRRVDEALGV FEEMCGKRTD
EGDVIKADSI HFNTLIDGLC KVGRMKEAEE LLVKMKTEEK CAPTTVTYNC LVGGYCIAGQ
LETAKEVVSR MKEDGIKPNV VTLNTLIGGM CRHHGVNMAI AFFTDMQREG LKGNVVTYTT
LIHAYCSVGN VENAMGLFDQ MLEDGCSPDA KIYYALISGL CQARRDHDAV RVVEKLKQSG
FSLDLLAYNM LIGLFCDKNN GEKVYEMLTD MEEAKMKPDS ITYNTLVSFF CKLKDFESVQ
KMMENMREDG LHPTVVTYGV IIEAYCSAGD VSEALKLFND MGSRSKVSPN TVIYNILINA
FCKAGNLGQA MSLKEEMKEK MVRPNVETYN ALFKCLNEVH QKETLFKLMD EMNQSSCEAN
QTTVEILMER LTSSDDLIKL KQFMQGYPVG YKVEKNFSFP CL
//
