ID A0A078IWS6_BRANA Unreviewed; 347 AA.
AC A0A078IWS6;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2051524.1};
DE SubName: Full=BnaA09g57260D protein {ECO:0000313|EMBL:CDY53834.1};
GN Name=BnaA09g57260D {ECO:0000313|EMBL:CDY53834.1};
GN Synonyms=BnabHLH027 {ECO:0000313|EMBL:CAA8287312.1};
GN ORFNames=DARMORV10_A09P65200.1 {ECO:0000313|EMBL:CAF2051524.1},
GN GSBRNA2T00011519001 {ECO:0000313|EMBL:CDY53834.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY53834.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY53834.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY53834.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAA8287312.1}
RP NUCLEOTIDE SEQUENCE.
RG Zhejiang university;
RL Submitted (JAN-2020) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:CAF2051524.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; LR757083; CAA8287312.1; -; Genomic_DNA.
DR EMBL; LR758306; CAA8391920.1; -; Genomic_DNA.
DR EMBL; LR759265; CAA8403544.1; -; Genomic_DNA.
DR EMBL; HG994363; CAF2051524.1; -; Genomic_DNA.
DR EMBL; LK033241; CDY53834.1; -; Genomic_DNA.
DR SMR; A0A078IWS6; -.
DR STRING; 3708.A0A078IWS6; -.
DR PaxDb; 3708-A0A078IWS6; -.
DR EnsemblPlants; CDY53834; CDY53834; GSBRNA2T00011519001.
DR Gramene; CDY53834; CDY53834; GSBRNA2T00011519001.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR CDD; cd18919; bHLH_AtBPE_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR024097; bHLH_ZIP_TF.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR PANTHER; PTHR12565; STEROL REGULATORY ELEMENT-BINDING PROTEIN; 1.
DR PANTHER; PTHR12565:SF312; TRANSCRIPTION FACTOR BHLH74; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 179..229
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 103..167
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..167
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 347 AA; 38327 MW; 3954361A21B2CD81 CRC64;
MGGESNNEGE MGLNHGHDPS MPLYAKTDPY FSSSDWDPVV NGGGFSSSHY PSVVMDNPGM
SCFTHYQSGS GYPDMPASLL PFGDCGGGGE SVGRLMRAGE SHDQVLDDGV LGASPTRKRR
QAEAESQRNK KAVEEYQEDT QRGSDQSQKK HKDGQNKESS QSEEAPKENY IHMRARRGQA
TNSHSLAERV RREKISERMR LLQELVPGCN KITGKAVMLD EIINYVQSLQ QQVEFLSMKL
ATVNPEVNID IDRIIAKDLL QPRDRNTPTL GLSPFTSFHG TIPNISTTAN PQYNSLPQTT
LESELQSLYQ MGFVSNPSTM SSFSPNNGKL KATQTCFCLF PFLCCLD
//
