ID A0A078IXL7_BRANA Unreviewed; 548 AA.
AC A0A078IXL7;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1989056.1};
DE SubName: Full=BnaC07g17080D protein {ECO:0000313|EMBL:CDY54918.1};
GN Name=BnaC07g17080D {ECO:0000313|EMBL:CDY54918.1};
GN ORFNames=DARMORV10_C07P26950.1 {ECO:0000313|EMBL:CAF1989056.1},
GN GSBRNA2T00014818001 {ECO:0000313|EMBL:CDY54918.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY54918.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY54918.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY54918.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1989056.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994371; CAF1989056.1; -; Genomic_DNA.
DR EMBL; LK033360; CDY54918.1; -; Genomic_DNA.
DR RefSeq; XP_013723691.1; XM_013868237.1.
DR STRING; 3708.A0A078IXL7; -.
DR PaxDb; 3708-A0A078IXL7; -.
DR EnsemblPlants; CDY54918; CDY54918; GSBRNA2T00014818001.
DR GeneID; 106427506; -.
DR Gramene; CDY54918; CDY54918; GSBRNA2T00014818001.
DR KEGG; bna:106427506; -.
DR OMA; CISQRAH; -.
DR OrthoDB; 460116at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd16531; RING-HC_RING1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044592; RING1A/B.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR46537:SF1; E3 UBIQUITIN-PROTEIN LIGASE RING1A-RELATED; 1.
DR PANTHER; PTHR46537; OS11G0578200 PROTEIN; 1.
DR Pfam; PF13923; zf-C3HC4_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 161..201
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 18..147
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 274..378
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 390..410
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..39
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 53..92
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..133
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 313..330
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 342..363
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 392..410
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 548 AA; 62918 MW; 568E78B798B44EA6 CRC64;
MREKEMNRLR AIWREEEKKR EREKWERERE GRSHESPTMP VKKQGDGGDQ QQQLDRFDPE
AEEKNEPEDL QETTVEKKDD EQEEVKRDEA EKEEEAVEEE EEEEEEEVVV EEEEEEEEEE
EEEEEDGDEE PEEDSKEKSP SGDKSEFMEI DLGEIRKDVQ CPICLGIIKK TRTVMECLHR
FCRECIDKSM RLGNNECPAC RKHCASRRSL RDDPKFDALI AALFTNIDSY EEEEFIFHED
DKARNKQIQA SIAEISQRQS EALVKRKSFG KEAAVLMRSQ RSGSGSRRRR NCRNTEHNAD
EAHDDDDNNE DNNNGEGRDS SSDERGPEVR VRKRRKRSAS RSTQHPSSAG ANNNNGNCGD
NDTEVYRDSS KGVSPGLVWN PEMLAWGRSA TRSNPRHENN TAGGSSKSVR NARVSRLVEY
LRSSVDGKSV EVDIHVKLVS LDTKCVPDLP QPYLCCRPTF LVKQLREFVA LEMHLKTEDV
ELLLVKKGLG GEDKTVENLP VMASASAASS KDEMKSLEDN ETLSKLKTDF NSSQEQHLTI
AYRQKQTE
//
