ID A0A078JAD7_BRANA Unreviewed; 1042 AA.
AC A0A078JAD7;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=BnaA08g29500D protein {ECO:0000313|EMBL:CDY60841.1};
GN Name=BnaA08g29500D {ECO:0000313|EMBL:CDY60841.1};
GN ORFNames=GSBRNA2T00030122001 {ECO:0000313|EMBL:CDY60841.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY60841.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY60841.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK033920; CDY60841.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078JAD7; -.
DR STRING; 3708.A0A078JAD7; -.
DR PaxDb; 3708-A0A078JAD7; -.
DR EnsemblPlants; CDY60841; CDY60841; GSBRNA2T00030122001.
DR Gramene; CDY60841; CDY60841; GSBRNA2T00030122001.
DR OMA; RARVNCF; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005667; C:transcription regulator complex; IBA:GO_Central.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR044977; RLT1-3.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR PANTHER; PTHR36968:SF8; HOMEOBOX-DDT DOMAIN PROTEIN RLT3 ISOFORM X1; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR Pfam; PF15612; WHIM1; 1.
DR Pfam; PF15613; WSD; 1.
DR SMART; SM00571; DDT; 1.
DR PROSITE; PS50827; DDT; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 253..312
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT REGION 62..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 143..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 488..508
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..91
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1042 AA; 117609 MW; 7BF1FF834E1B1C2D CRC64;
MHPNPGEMDE RRKKSSVAAA VRAKIPQPRG SALRKINCQK LLTSQYILAK VFRKDGPSLG
FQFDHLPPSS SSLDQQRVGR KRKVSEQHTS QDDCVVVKKK QYGIGKGLMT AWRVMNPNSH
ERATLAQSNP KKTKTQLASI LKQKQKKKKS MEKKRTSINT ETTEELNKDE TVGFSEKCEL
GEVFKETCQT ISILVDDEEL ERQEGLVNPP LTCSCHTATC GSCFLCKDLL PKFPPSSVGM
RLPFALHPWN SSPESVKKLF KVVHFLYTYS VTLDICPFTI DEFTRAFHDK DSLLLGKIHL
SLLKLLLVDV ETELQRGSFS TLSISCKFLA LLQSVESQIR ILDMWKDSLN SLTWAEILRQ
ILVAAGFGSV KRAAGQSEEL SKHALFILED GLVACGILKE RRLMKKYGLR LGTLKGELFR
MLNEQGGKNG LKISELANAA VEVAGLNLAT ASEEERERSI CSTLASDITL FEKISESTYR
ARVNCFSEDH ESDSGESGSV DDDESGDELG RVSESFVFRK AKCRKRRKQV LEVCSEIDES
HPGEAWLLGL MEGEYSDLSI EEKLDVFIAL IDLLSSGSTI RMEDLPRAMV DCAPSIYSHG
SGGKIKRASS SNHPRVSWVH GGERIEKLSK PSDSHPVDSS SIVGADFAKL AGDNVHPMQS
VYLGSDRRFN RYWLFLGPCN ANDPGHRCVY FESSEDGHWE VISHKEALRA LLSVLDDRGR
REARLIESLE KRESFLCQAM LRRIDHVVRE DSSSSPVSDI DNNNLCLNEI ANDQQAAIVF
EKRGNSLLWS LVQEFDEWIW DKYYLNLNVV KHSRRSYLDS LTRCKSCHDL YWRDEKHCKI
CHATFELDID LEERYAIHEA TCSRKNEESS DSFPDHKVLS SQLQSLKAAV YAIESAMPED
ALIGAWKKSA HRLWAKRLRR SSTLSEITQV IGDFVGAINE DWLWHFGEEE EGEIITSFPS
MPRTTSAIAL WLVKLDTLIA SYVVEKAPQP EGNQLNRTRK YKYELTSLSS SSVSVLKCFL
SIARFLFHLR PTTTSRFHIL VI
//
