GenomeNet

Database: UniProt
Entry: A0A078JG62_BRANA
LinkDB: A0A078JG62_BRANA
Original site: A0A078JG62_BRANA 
ID   A0A078JG62_BRANA        Unreviewed;       241 AA.
AC   A0A078JG62;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   16-OCT-2019, entry version 31.
DE   SubName: Full=BnaAnng19250D protein {ECO:0000313|EMBL:CDY64220.1};
GN   Name=BnaAnng19250D {ECO:0000313|EMBL:CDY64220.1};
GN   ORFNames=GSBRNA2T00041004001 {ECO:0000313|EMBL:CDY64220.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae;
OC   Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY64220.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY64220.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X.,
RA   Chiquet J., Belcram H., Tong C., Samans B., Correa M., Da Silva C.,
RA   Just J., Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P.,
RA   Noel B., Labadie K., Alberti A., Charles M., Arnaud D., Guo H.,
RA   Daviaud C., Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H.,
RA   Tack D., Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G.,
RA   Renault V., Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H.,
RA   Chalabi S., Hu Q., Fan C., Tollenaere R., Lu Y., Battail C., Shen J.,
RA   Sidebottom C.H., Wang X., Canaguier A., Chauveau A., Berard A.,
RA   Deniot G., Guan M., Liu Z., Sun F., Lim Y.P., Lyons E., Town C.D.,
RA   Bancroft I., Wang X., Meng J., Ma J., Pires J.C., King G.J.,
RA   Brunel D., Delourme R., Renard M., Aury J.M., Adams K.L., Batley J.,
RA   Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W., Sharpe A.G.,
RA   Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; LK034422; CDY64220.1; -; Genomic_DNA.
DR   EnsemblPlants; CDY64220; CDY64220; GSBRNA2T00041004001.
DR   Gramene; CDY64220; CDY64220; GSBRNA2T00041004001.
DR   OMA; RERDICG; -.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   InterPro; IPR022357; MIP_CS.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00340; HALZ; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
DR   PROSITE; PS00221; MIP; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000028999};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT   DOMAIN      118    178       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND    120    179       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   COILED       83    103       {ECO:0000256|SAM:Coils}.
FT   COILED      184    211       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   241 AA;  27191 MW;  C5A0EDE416221245 CRC64;
     MGLDDSCNTG LVLGLGLSPT HNSYNYAIKK SSATVDHHVN PSLTLSLSGE SYKVEKTVSG
     AGDQIYRQTS SHSGISSFSS GRIKREREVC GDGEEEAEET EKRVVCSRVR DDHEDEEGVS
     ARKKLRLTKQ QSIVLEENFK MHSTLNPKQK QALARQLSLR PRQVEVWFQN RRARTKLKQT
     EMDCEFLKKC CETLTDENRR LQKELQDLKA LKMSQPFYMH IPPATLIGAF SIPFINPSAA
     C
//
DBGET integrated database retrieval system