ID A0A078JIG2_BRANA Unreviewed; 435 AA.
AC A0A078JIG2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=BnaA10g28790D protein {ECO:0000313|EMBL:CDY65561.1};
GN Name=BnaA10g28790D {ECO:0000313|EMBL:CDY65561.1};
GN ORFNames=GSBRNA2T00046807001 {ECO:0000313|EMBL:CDY65561.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY65561.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY65561.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the THOC5 family.
CC {ECO:0000256|ARBA:ARBA00008044}.
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DR EMBL; LK034835; CDY65561.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078JIG2; -.
DR STRING; 3708.A0A078JIG2; -.
DR PaxDb; 3708-A0A078JIG2; -.
DR EnsemblPlants; CDY65561; CDY65561; GSBRNA2T00046807001.
DR Gramene; CDY65561; CDY65561; GSBRNA2T00046807001.
DR OMA; KFMAQKE; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0000445; C:THO complex part of transcription export complex; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006406; P:mRNA export from nucleus; IBA:GO_Central.
DR GO; GO:0032786; P:positive regulation of DNA-templated transcription, elongation; IBA:GO_Central.
DR InterPro; IPR019163; THO_Thoc5.
DR PANTHER; PTHR13375; FMS INTERACTING PROTEIN; 1.
DR PANTHER; PTHR13375:SF5; THO COMPLEX SUBUNIT 5A; 1.
DR Pfam; PF09766; FmiP_Thoc5; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT REGION 258..288
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 267..288
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 435 AA; 50143 MW; 4E099C9473A48987 CRC64;
MQREMSKDAM APLELLRESK SSIEEIISRM LSIKNQGLPK SENRELLTQM FLNFINLRQA
NRAILMEEER VRRERESSKS PMDLTSLQLH NLTYEKSHYL KATRSSREFK SKYPNIDLIS
EQDFFRDAPE AIKSQTLSND ASHDLMLKRL NFELHQRKEV CKLRAELEQR KNCLLEANSE
RAKFLSSLPL HLKSLKKASL PVQNQLSLPN PKKLKYHDLA ELLPPPLYVV YSKFMAQKEA
FEEKIDIEVS GSLKDAQSYA RQQAELNQES SDDDGKRQRK RLKKESSDEA GLYRVHPLKL
VLHIYADETP DPKSHKLVML KFEYLLKLNV VCVGIEESQD GPERNILCTL FPDDAGLEPP
HQSTKLILGD DHAFDESRTS RPYKWAQHLA GIEVLPEMSL FVTGKNNTQN SDTASVSDHY
SVQTVLRRIR AQKKG
//