ID A0A078JIT4_BRANA Unreviewed; 759 AA.
AC A0A078JIT4;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=BnaCnng48280D protein {ECO:0000313|EMBL:CDY65691.1};
GN Name=BnaCnng48280D {ECO:0000313|EMBL:CDY65691.1};
GN ORFNames=GSBRNA2T00048016001 {ECO:0000313|EMBL:CDY65691.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY65691.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY65691.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SIMILARITY: Belongs to the cyclic nucleotide-gated cation channel (TC
CC 1.A.1.5) family. {ECO:0000256|ARBA:ARBA00010486}.
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DR EMBL; LK034902; CDY65691.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078JIT4; -.
DR STRING; 3708.A0A078JIT4; -.
DR PaxDb; 3708-A0A078JIT4; -.
DR EnsemblPlants; CDY65691; CDY65691; GSBRNA2T00048016001.
DR Gramene; CDY65691; CDY65691; GSBRNA2T00048016001.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
DR GO; GO:0030553; F:cGMP binding; IEA:UniProtKB-KW.
DR GO; GO:0005216; F:monoatomic ion channel activity; IEA:InterPro.
DR CDD; cd00038; CAP_ED; 1.
DR Gene3D; 1.10.287.70; -; 1.
DR Gene3D; 1.10.287.630; Helix hairpin bin; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR000595; cNMP-bd_dom.
DR InterPro; IPR018490; cNMP-bd_dom_sf.
DR InterPro; IPR005821; Ion_trans_dom.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR PANTHER; PTHR45651; CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED; 1.
DR PANTHER; PTHR45651:SF11; CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED; 1.
DR Pfam; PF00520; Ion_trans; 1.
DR SMART; SM00100; cNMP; 1.
DR SUPFAM; SSF51206; cAMP-binding domain-like; 1.
DR SUPFAM; SSF81324; Voltage-gated potassium channels; 1.
DR PROSITE; PS50042; CNMP_BINDING_3; 1.
PE 3: Inferred from homology;
KW Calmodulin-binding {ECO:0000256|ARBA:ARBA00022860};
KW cGMP {ECO:0000256|ARBA:ARBA00022535};
KW cGMP-binding {ECO:0000256|ARBA:ARBA00022992};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022992};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 202..223
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 292..311
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 363..384
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 480..503
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 588..664
FT /note="Cyclic nucleotide-binding"
FT /evidence="ECO:0000259|PROSITE:PS50042"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 759 AA; 86181 MW; E6171461BD8762EB CRC64;
MASPKENDDV PMLPISDTSR TRPFTSRSRS VSLSNTCSTI DGFDSSTVVL GYTGPLRAQR
RPPLVQMSGP LSSTRNPEPL FLLPPPDSVG ISSSQPERYP SFATLEHKNS DDEFVLKHAN
LLRSGQLGMC NDPYCTTCPS YYNRKAAQIP SSRISAFFDS KFHNALYDDA KGWARRFATT
ANRYLPGIMN PHSKFVQSWT KFFALSCLLA IFIDPLFFFL ILVKQNDKCI VIDWPMAKAF
VAVRSVTDIL FSVNILLQFR LAYVAPESTV VGAGQLVAHP RKIARHYFRG KFLLDLFIVM
PLPQILILWI IPAHLGASGA NYAKNLLRAA VLFQYIPKLY RLLPLLAGQT PTGFIFESAW
ANFVINLLTF MLAGHVVGSC WYLFGLQRVN QCLRDACGYS DHECRNLIDC GRGDSSEAFA
AWKGDASASA CFQEGGFPYG IYMKAVNLTS HTSLFTRYSY SLFWGFQQIS TLAGNQVPSY
FLGEVFFTMG IIGLGLLLFA LLIGNMQNFL QALGRRNLEM TLRRRDVEQW MSHRRLPEGI
RKRVREAERF NWAATRGVNE ELLFENMPDD LQRDIRRHLF IFLKKVRIFS LMDESILDAI
RERLKQRTYI SSSTVLHRGG LVEKMVFIVR GEMESIGEDG SVLPLSEGDV CGEELLTWCL
ERSSVNPDGT RIRIPSKGLL SYRNVKCVTN VEAFSLSVAD LEDVTSLFSR FLRNPRVQGA
IRYESPYWRL RAARQIQVAW RYRRRRLQRL YTAQSSYSL
//
