ID A0A078JL64_BRANA Unreviewed; 599 AA.
AC A0A078JL64;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=BnaUnng01930D protein {ECO:0000313|EMBL:CDY67160.1};
GN Name=BnaUnng01930D {ECO:0000313|EMBL:CDY67160.1};
GN ORFNames=GSBRNA2T00059665001 {ECO:0000313|EMBL:CDY67160.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY67160.1};
RN [1] {ECO:0000313|EMBL:CDY67160.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY67160.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; LK035819; CDY67160.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078JL64; -.
DR STRING; 3708.A0A078JL64; -.
DR PaxDb; 3708-A0A078JL64; -.
DR EnsemblPlants; CDY67160; CDY67160; GSBRNA2T00059665001.
DR Gramene; CDY67160; CDY67160; GSBRNA2T00059665001.
DR OMA; PNAMENT; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR PANTHER; PTHR46481:SF4; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 39; 1.
DR PANTHER; PTHR46481; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF14372; hAT-like_RNase-H; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 61..102
FT /note="BED-type"
FT /evidence="ECO:0000259|Pfam:PF02892"
FT DOMAIN 432..512
FT /note="hAT-like transposase RNase-H fold"
FT /evidence="ECO:0000259|Pfam:PF14372"
SQ SEQUENCE 599 AA; 67899 MW; 0E184AA0F38E4F6C CRC64;
MEWNVNNAFK TYKEMEPKAM MDMSLLPHSS DPTDIALGSS SDNAIANNTA PPKRKKTMTS
VFLKYFETSP DTKTRKCKLC AQSYSIATAT GNLGRHLNNR HPGYDKATDV ATTSVPQKPQ
VAVKPSQSQS KAPQIDYDHL NWLVLKWLSL SSLPPSTVDE TWLGNSFKFL NPSVQLWPAE
KYKAVLKEVF RSMQGDVKTT LEHVQSRVSL TLSFWSSYEN IFYMSVTGNW IDENWSSHRL
LLDICRIPYP SGGSEIYASL LKVFKMYSIE DRVLCCTHDN SENAIHACHS LKEYLDGQKV
LPFCYIPCAA QTLNDIIDEG LATIKPIISK IREFTQELNA SMELSDDFVQ LTTTYQEGNW
KLPIDASSRW SGNYQMVNIL CKAGKSLDSV IRKNEESLEN RMVLSSAEKN AVSIVHSYLD
LDSFRKTTDD MCTNKDLTVG LALLFMDNIS EMITTCQKSC HNPDWLRTCA ENMSQKARSY
NTQVCNVFTY ITAVLDPRIK TEYIPETLNL ESYIDEARGH FIRNYASPHH FTSSLASGYR
PHQEIDEGGG GNISFAEEIA RRKRRGSMSN NRTTKHNTVL SLLRHGSPAY RLKKKHRLN
//
