ID A0A078JR99_BRANA Unreviewed; 739 AA.
AC A0A078JR99;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2096718.1};
DE SubName: Full=BnaAnng32650D protein {ECO:0000313|EMBL:CDY70113.1};
GN Name=BnaAnng32650D {ECO:0000313|EMBL:CDY70113.1};
GN ORFNames=DARMORV10_A05P15570.1 {ECO:0000313|EMBL:CAF2096718.1},
GN GSBRNA2T00096533001 {ECO:0000313|EMBL:CDY70113.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY70113.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY70113.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY70113.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2096718.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; HG994359; CAF2096718.1; -; Genomic_DNA.
DR EMBL; LK041202; CDY70113.1; -; Genomic_DNA.
DR STRING; 3708.A0A078JR99; -.
DR PaxDb; 3708-A0A078JR99; -.
DR EnsemblPlants; CDY70113; CDY70113; GSBRNA2T00096533001.
DR Gramene; CDY70113; CDY70113; GSBRNA2T00096533001.
DR OMA; CIHAYVK; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR47928:SF186; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 197..231
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 267..297
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 298..332
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 400..430
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 431..465
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 466..496
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 646..739
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 739 AA; 82589 MW; D083AC14A9BE1179 CRC64;
MASFSTAQPL SLPRHPTFSN PNQPTANNDR SSHTISLIDR CSNLRQLKQI HAQMVRTGLF
SDPYSASKLF AISALSHFAS LDYACKVFDQ IPQPNSFTWN TLIRAYASGP DPLRSISVFL
DMVSDSRFGP NKYTFPFLIK AAAEVSSLSL GQSLHGMAVK SAVGCDVFVA NSLIHCYFSC
GDLDSACKVF TTIQEKDVVS WNSMITGFVQ KGSPDKALEL FKKMESEDVK ASHVTMVGVL
SACAKTRNLE FGRRVCSYIE ENRVNVNLTL ANAMLDMYTK CGSIEDAKRL FDKMEERDNV
TWTTMLDGYA ILEDYEAARE VLNSMPKKDI VAWNALISAY EQNGKPNEAL LVFHELQLQK
NIKLNQITLV STLSACAQVG ALELGRWIHS YIKKHGIRLN FYVTSALIHM YSKCGDLEKA
REVFSSVEKR DVFVWSAMIG GLAMHGCGNE ALDMFYKMQE ANVKPNGVTF TNVFCACSHS
GLVDEAELLF KEMESSYGIV PQEKHYACIV DVLGRSGYLE KAVKFIEAMP IPPSASVWGA
LLGACKIHAN LSLAERACTR LLELEPRNDG AHVLLSNIYA KSGKWESVSE LRKHMRVTGL
KKEPGCSSIE IDGTIHEFLS GDNEHPMCEK VYGKLNEVVE SLKANGYEPE MSQVLQIIDE
EEMKEQSLNL HSEKLAICYG LISTEAPKAI RVIKNLRVCG DCHSVAKLIS QLYDREIIVR
DRYRFHHFRN GQCSCNDFW
//
