ID A0A078JRQ5_BRANA Unreviewed; 454 AA.
AC A0A078JRQ5;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=UBX domain-containing protein {ECO:0000256|PIRNR:PIRNR037991, ECO:0000259|PROSITE:PS50033};
GN Name=BnaCnng61890D {ECO:0000313|EMBL:CDY69105.1};
GN ORFNames=GSBRNA2T00083063001 {ECO:0000313|EMBL:CDY69105.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY69105.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY69105.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK038660; CDY69105.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078JRQ5; -.
DR STRING; 3708.A0A078JRQ5; -.
DR PaxDb; 3708-A0A078JRQ5; -.
DR EnsemblPlants; CDY69105; CDY69105; GSBRNA2T00083063001.
DR Gramene; CDY69105; CDY69105; GSBRNA2T00083063001.
DR OMA; PAIFDCQ; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0043130; F:ubiquitin binding; IBA:GO_Central.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd02958; UAS; 1.
DR CDD; cd14273; UBA_TAP-C_like; 1.
DR CDD; cd01767; UBX; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR Gene3D; 3.40.30.10; Glutaredoxin; 1.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR006577; UAS.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR017346; UBX_7/2.
DR InterPro; IPR001012; UBX_dom.
DR InterPro; IPR003903; UIM_dom.
DR PANTHER; PTHR23322; FAS-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR23322:SF6; UBX DOMAIN-CONTAINING PROTEIN 7; 1.
DR Pfam; PF13899; Thioredoxin_7; 1.
DR Pfam; PF14555; UBA_4; 1.
DR Pfam; PF00789; UBX; 1.
DR PIRSF; PIRSF037991; UCP037991_UBX7/2; 1.
DR SMART; SM00594; UAS; 1.
DR SUPFAM; SSF52833; Thioredoxin-like; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50033; UBX; 1.
DR PROSITE; PS50330; UIM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 371..452
FT /note="UBX"
FT /evidence="ECO:0000259|PROSITE:PS50033"
FT REGION 284..344
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 305..344
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 454 AA; 50520 MW; 09477BCDF5E341F9 CRC64;
MEGMLSSSEQ ERLVSSFLEI AVGQTSETAR QFLGATSWKL EEAIQLFYVG GEVGVLPSGG
THTQPTVDDP MAAQSWGAAE TGNERMQNEV DEVRAPLPVV RETLYGDSMY YGATRVGSSQ
REPASLIAFR NFSEEPKSPG IWEPDEEAAS APRDSLASLY RPPFHLMLHG SFEQAKATSS
SQDKWLLVNL QSTTEFSSHM LNRDTWANEA VSQTIKANFI FWQVYDDTTE GRKVCTYYKL
ESIPVVLVID PTTGQKMRMW SGMVEPETLL EDLVPFMDGG PREHFASLSK KRPRGSFSLA
PHSKPKEVAA KDEEEEELQR ALAASLEDND MKESSDDKSA ITPEEEVAVE AVTTTVLPTF
PPLPEEPKGG DRSVQCRVGI RLPNGQRVQR NFLKTDSIQL LWSFCYSQLE ESERKKPLKL
TQAIPGESKT LEYESNLTLE QSGVANSMIS ATWE
//
