ID   A0A081FYB5_9GAMM        Unreviewed;       752 AA.
AC   A0A081FYB5;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 32.
DE   SubName: Full=Transcription accessory protein (S1 RNA-binding domain) {ECO:0000313|EMBL:KEA63520.1};
GN   ORFNames=ADIMK_2299 {ECO:0000313|EMBL:KEA63520.1};
OS   Marinobacterium lacunae.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC   Oceanospirillaceae; Marinobacterium.
OX   NCBI_TaxID=1232683 {ECO:0000313|EMBL:KEA63520.1, ECO:0000313|Proteomes:UP000028252};
RN   [1] {ECO:0000313|EMBL:KEA63520.1, ECO:0000313|Proteomes:UP000028252}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AK27 {ECO:0000313|EMBL:KEA63520.1,
RC   ECO:0000313|Proteomes:UP000028252};
RA   Singh A., Pinnaka A.K.;
RT   "Marinobacterium kochiensis sp. nov., isolated from sediment sample
RT   collected from Kochi backwaters in Kerala, India.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KEA63520.1}.
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DR   EMBL; JMQN01000036; KEA63520.1; -; Genomic_DNA.
DR   RefSeq; WP_036188080.1; NZ_JMQN01000036.1.
DR   AlphaFoldDB; A0A081FYB5; -.
DR   STRING; 1232683.ADIMK_2299; -.
DR   PATRIC; fig|1232683.4.peg.2258; -.
DR   eggNOG; COG2183; Bacteria.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000028252; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000028252}.
FT   DOMAIN          642..711
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          706..752
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   752 AA;  83250 MW;  AA50D65C839BA15C CRC64;
     MQIEQRLAAD LGVDAARVRA AVALLDEGAS VPFIARYRKE ATGALDDTQL RELHSRLGQL
     RELESRRDAI LRQLSESGQL TEALNRDLLA ADTRARLEDL YAPYRPKRRN KAQEAREAGL
     GPLAETLLKT PSSEPTRAAA AYIAPDKGID DSEAALEGAR HILIEQLAEA ADLVDALRKT
     LWQQGRLATR AARGKADPDS KFRDYFEYAE PIARIPSHRA LALLRGEQEG VIKYKLELPE
     GREDLGVELI QRHWQLRGQL SPWMQATLDQ CWSRKLQPQL ENELVKRLRE QSEAAAIEVF
     ARNLHDLLLA SPAGARVTLG LDPGLRTGVK VAVIDRTGRL LEHTAIYPHA PRNQWDQSLA
     TLATLCRRHH VELIAIGNGT ASRETEQLAR ELAQRETALT LQPVMVSEAG ASVYSASELA
     AQEFPDLDVS IRGAVSIARR LQDPLAELVK IDPRSIGVGQ YQHDVDQQQL AQSLDAVVET
     CVNHVGVDLN TASPALLRHV SGLNAGLADS IVAWRDEQGA FRNRRELLKV KRLGPKAFEL
     CAGFLRIRDG DEPLDNSAVH PESYPLVKEI ASAAGLDQRQ LLNQPERLRQ LDHSRFVSEL
     YGRYTVSDVF AELEKPGRDP RPEFRSVQYE EGVSKLSDLN PGMQLEGVVT NVTQFGAFVD
     IGVHQDGLVH ISELADRFIK DPHEVVTSGQ IVKVRVLEVD ERRKRISLSM KDPDNGNKGT
     QGAKPAAHQP SAPVREGSLG ERLRAAGVKS RR
//