ID A0A081PC03_9SPHI Unreviewed; 298 AA.
AC A0A081PC03;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=HTH LytTR-type domain-containing protein {ECO:0000259|PROSITE:PS50930};
GN ORFNames=N180_00905 {ECO:0000313|EMBL:KEQ28226.1};
OS Pedobacter antarcticus 4BY.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=1358423 {ECO:0000313|EMBL:KEQ28226.1, ECO:0000313|Proteomes:UP000028007};
RN [1] {ECO:0000313|EMBL:KEQ28226.1, ECO:0000313|Proteomes:UP000028007}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4BY {ECO:0000313|EMBL:KEQ28226.1,
RC ECO:0000313|Proteomes:UP000028007};
RA Shivaji S., Ray M.K., Rao N.S., Saiserr L., Jagannadham M.V., Kumar G.S.,
RA Reddy G., Bhargava P.M.;
RT "Sphingobacterium antarcticus sp. nov. a Psychrotrophic Bacterium from the
RT Soils of Schirmacher Oasis, Antarctica.";
RL Int. J. Syst. Bacteriol. 42:102-106(1992).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KEQ28226.1}.
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DR EMBL; JNFF01000117; KEQ28226.1; -; Genomic_DNA.
DR RefSeq; WP_037444859.1; NZ_JNFF01000117.1.
DR AlphaFoldDB; A0A081PC03; -.
DR eggNOG; COG3279; Bacteria.
DR OrthoDB; 9787344at2; -.
DR Proteomes; UP000028007; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 2.40.50.1020; LytTr DNA-binding domain; 1.
DR InterPro; IPR007492; LytTR_DNA-bd_dom.
DR Pfam; PF04397; LytTR; 1.
DR SMART; SM00850; LytTR; 1.
DR PROSITE; PS50930; HTH_LYTTR; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028007};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 48..67
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 88..110
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 125..144
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 180..287
FT /note="HTH LytTR-type"
FT /evidence="ECO:0000259|PROSITE:PS50930"
SQ SEQUENCE 298 AA; 34397 MW; 6A98A23D909875D5 CRC64;
MQKYKNIDDK TLPYLGLGWF LLIACFITLC LIWPAADIHI WNILTEEWFQ RAFVNTLVVV
ILMMKIVGYS GRYLDMKNPW EENPWERLLM QLIFGWALSA GAGYLVTWFF SAQLHIDNRV
VRSRSLILLI SLLLNSLYIV RYFILRVVEP KFSELEPVPE PLPEPAMETE REQEGYSVFF
LIPDGKGEKK VLVIDIAYIS RAENNTLIYS HGGAIDICYL SLDFLISRLD PDSFFRANRS
YIIAKEAIEG YSRQSDRKLS VNLIPPSDNP AVVSRTKAKQ LIYWFKAGKG SISILRDQ
//
