ID A0A081PDS4_9SPHI Unreviewed; 716 AA.
AC A0A081PDS4;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KEQ28847.1};
GN ORFNames=N180_19585 {ECO:0000313|EMBL:KEQ28847.1};
OS Pedobacter antarcticus 4BY.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=1358423 {ECO:0000313|EMBL:KEQ28847.1, ECO:0000313|Proteomes:UP000028007};
RN [1] {ECO:0000313|EMBL:KEQ28847.1, ECO:0000313|Proteomes:UP000028007}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4BY {ECO:0000313|EMBL:KEQ28847.1,
RC ECO:0000313|Proteomes:UP000028007};
RA Shivaji S., Ray M.K., Rao N.S., Saiserr L., Jagannadham M.V., Kumar G.S.,
RA Reddy G., Bhargava P.M.;
RT "Sphingobacterium antarcticus sp. nov. a Psychrotrophic Bacterium from the
RT Soils of Schirmacher Oasis, Antarctica.";
RL Int. J. Syst. Bacteriol. 42:102-106(1992).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KEQ28847.1}.
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DR EMBL; JNFF01000102; KEQ28847.1; -; Genomic_DNA.
DR RefSeq; WP_037443330.1; NZ_JNFF01000102.1.
DR AlphaFoldDB; A0A081PDS4; -.
DR eggNOG; COG0489; Bacteria.
DR eggNOG; COG3206; Bacteria.
DR OrthoDB; 972983at2; -.
DR Proteomes; UP000028007; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003856; LPS_length_determ_N_term.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR32309; TYROSINE-PROTEIN KINASE; 1.
DR PANTHER; PTHR32309:SF13; TYROSINE-PROTEIN KINASE ETK-RELATED; 1.
DR Pfam; PF02706; Wzz; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028007};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 454..478
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 2..83
FT /note="Polysaccharide chain length determinant N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02706"
FT COILED 358..423
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 716 AA; 80551 MW; 61AB5DD5DE780F01 CRC64;
MDFKAFNSHL KRYKWLIILV PLVTVVVAYL LVKNLPDQYK SQAQISTGLI DQSKQVATTE
QNLDYFKLSQ QFSNIIEKIK MKKISSILSY HLILHDLENP GQSYKKYSPK LDSLSDPQRN
ELIALYKEKL QKKTVLTPVD NKGKYPLYDI VVSMGYDEKG IDKNLEINRN DGSDFINVTY
TSNNPELSAF VVNTLTTEFI RNYTLDVGYN QNNSMVLLDS LLKTKEATMN AKNADLKQFK
MQNGVINLDK QSEAVYSQIS LNEERKAQAI SAIQANSGAI RAIEARLRGK DPLAGGNVIS
QNREIVNLKN QLKVANDRYI DGGFKVADKK RVDSLTNLMS EKTAANSDQN ITDPTVNKQN
LIQQRSTLEI AMNQAKSSIS AINRELAVLK GKYNSMVPFD AGIQNYERDA DLATKDYMDA
LNRYNQTRTE QNIGLKLNIA QVGLIGTPEP SKKMVLTAAA GIGSFALCFM TVVLLFFLDR
SIINAKQLTA LTSLPVIGHL HYVNIIKSFK EIWGDGDAPE YKVFKNQLRT LRLDISSEMD
RDSSRILGIT SLGNGEGKSF ISSSLAYAFA KTGKKVLLIG GESQAIENEK TKELTARGNF
ETFLIKREIN ANDLITVLNK NEDNTSLLEI QSLRNLRAGF DILRNEFDLI IIDIHSINEV
NLAKEWLLFA EKTIAVFEYG KVLSDEEKEL LPYLKEQKGF IGWVLNKMKA DYKGKS
//
