ID A0A084JF26_9CLOT Unreviewed; 379 AA.
AC A0A084JF26;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Transposase {ECO:0000313|EMBL:KEZ87560.1};
GN ORFNames=IO99_04635 {ECO:0000313|EMBL:KEZ87560.1};
OS Clostridium sulfidigenes.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=318464 {ECO:0000313|EMBL:KEZ87560.1, ECO:0000313|Proteomes:UP000028542};
RN [1] {ECO:0000313|EMBL:KEZ87560.1, ECO:0000313|Proteomes:UP000028542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=113A {ECO:0000313|EMBL:KEZ87560.1,
RC ECO:0000313|Proteomes:UP000028542};
RA Honkalas V.S., Dabir A.P., Arora P., Dhakephalkar P.K.;
RT "Draft genome of Clostridium sulfidigenes 113A isolated from sediments
RT associated with methane hydrate from Krishna Godavari basin.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KEZ87560.1}.
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DR EMBL; JPMD01000010; KEZ87560.1; -; Genomic_DNA.
DR RefSeq; WP_035130785.1; NZ_JPMD01000010.1.
DR AlphaFoldDB; A0A084JF26; -.
DR STRING; 318464.IO99_04635; -.
DR GeneID; 84600383; -.
DR eggNOG; COG0675; Bacteria.
DR Proteomes; UP000028542; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000028542};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..42
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 174..293
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 306..374
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT COILED 203..263
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 379 AA; 44091 MW; D58FBFA82241DCCC CRC64;
MILGKKVRLY PTKEHEQKLW QSVGTARFIY NWTLARQEEN YTLKGTRKNG GKFISDNDLR
KELTILKKTE LNWLNEVSNN VAKQAVKDGC EAYKKFFKGL ADKPRFKSRR KSKPSFYNDT
SKLKVKESSV LIEKVGWVTI KKNSIPINCK YTNPRISFDG KYWFIAVGIE KENPIVALTT
ESIGIDLGIK DLAICSNGMT FKNINKTRVV KQLEKRLRRL QRRVSRKYLK NKEGSKFVKT
SNIIKIEKQI RLLHRKLANI RSNYNHQATN KIVKTKPSRV VMETLNIKGM MKNKHLSKAI
SKQCLYEFKK QMQYKCEFNG IEFIEADKWY PSSKTCSKCG HVKPKLSLSE RTYICEECGL
VIDRDYNASI NLSRYELVG
//
