ID   A0A085G1R2_9ENTR        Unreviewed;       711 AA.
AC   A0A085G1R2;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   SubName: Full=Class III (Anaerobic) ribonucleotide reductase, large subunit {ECO:0000313|EMBL:KFC77657.1};
DE            EC=1.-.-.- {ECO:0000313|EMBL:KFC77657.1};
DE            EC=1.17.4.2 {ECO:0000313|EMBL:KFC77657.1};
GN   Name=nrdD {ECO:0000313|EMBL:KFC77657.1};
GN   ORFNames=GBAG_3628 {ECO:0000313|EMBL:KFC77657.1};
OS   Buttiauxella agrestis ATCC 33320.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Buttiauxella.
OX   NCBI_TaxID=1006004 {ECO:0000313|EMBL:KFC77657.1, ECO:0000313|Proteomes:UP000028653};
RN   [1] {ECO:0000313|EMBL:KFC77657.1, ECO:0000313|Proteomes:UP000028653}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33320 {ECO:0000313|EMBL:KFC77657.1,
RC   ECO:0000313|Proteomes:UP000028653};
RA   Plunkett G.III., Neeno-Eckwall E.C., Glasner J.D., Perna N.T.;
RT   "ATOL: Assembling a taxonomically balanced genome-scale reconstruction of
RT   the evolutionary history of the Enterobacteriaceae.";
RL   Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KFC77657.1}.
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DR   EMBL; JMPI01000063; KFC77657.1; -; Genomic_DNA.
DR   RefSeq; WP_034498791.1; NZ_JMPI01000063.1.
DR   AlphaFoldDB; A0A085G1R2; -.
DR   STRING; 1006004.GBAG_3628; -.
DR   eggNOG; COG1328; Bacteria.
DR   OrthoDB; 9804622at2; -.
DR   Proteomes; UP000028653; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008998; F:ribonucleoside-triphosphate reductase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR   CDD; cd01675; RNR_III; 1.
DR   Gene3D; 3.20.70.20; -; 1.
DR   InterPro; IPR005144; ATP-cone_dom.
DR   InterPro; IPR019777; Form_AcTrfase_GR_CS.
DR   InterPro; IPR001150; Gly_radical.
DR   InterPro; IPR012833; NrdD.
DR   NCBIfam; TIGR02487; NrdD; 1.
DR   PANTHER; PTHR21075; ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE; 1.
DR   PANTHER; PTHR21075:SF0; ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE; 1.
DR   Pfam; PF03477; ATP-cone; 1.
DR   Pfam; PF13597; NRDD; 1.
DR   SUPFAM; SSF51998; PFL-like glycyl radical enzymes; 1.
DR   PROSITE; PS51161; ATP_CONE; 1.
DR   PROSITE; PS00850; GLY_RADICAL_1; 1.
DR   PROSITE; PS51149; GLY_RADICAL_2; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW   ProRule:PRU00492};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW   ProRule:PRU00492};
KW   Organic radical {ECO:0000256|ARBA:ARBA00022818, ECO:0000256|PROSITE-
KW   ProRule:PRU00493}; Oxidoreductase {ECO:0000313|EMBL:KFC77657.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028653}.
FT   DOMAIN          3..92
FT                   /note="ATP-cone"
FT                   /evidence="ECO:0000259|PROSITE:PS51161"
FT   DOMAIN          582..707
FT                   /note="Glycine radical"
FT                   /evidence="ECO:0000259|PROSITE:PS51149"
FT   MOD_RES         680
FT                   /note="Glycine radical"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00493"
SQ   SEQUENCE   711 AA;  79641 MW;  81A9E209A0B7EEBA CRC64;
     MTPHVMKRDG CKVPFTSERI KEAILRAAKA AGVDDADYCG RVADIVRAQM EGRSQVDIGE
     IQTAVENQLM AGDYKQLARA YIEYRHDRDI EREKRGRLNQ EIRGLVEQTN SALLNENANK
     DSKVIPTQRD LLAGIVAKHY ASQHLLPRDV VLAHERGDIH YHDLDYSPFF PMFNCMLIDL
     KGMLTHGFKM GNAEIEPPKS ISTATAVTAQ IIAQVASHIY GGTTINRIDE VLAPFVTESF
     EKHRQTAEKW QIPDAEGYAL SRTEKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS
     WESRLIQTSI LRNRIAGLGK NRKTAVFPKL VFAIKDGLNH KAGDANYDIK QLALECASKR
     MYPDILNYDQ VVKVTGSFKT PMGCRSFLGV YEENGEQIHD GRNNIGVISL NLPRIALEAK
     GDESAFWKLL DERLELAYKA LMTRIARLDG VKARVAPILY MEGACGVRLK ADDDVSEIFK
     NGRASISLGY IGIHETVNAL FGNQHVYDSE ELRAKAVAIV ERLRLATDTW KDETGYGFSL
     YSTPSENLCD RFCRLDTAEF GVVPGVTDKG YYTNSFHLDV EKKVNPYDKI DFEAPYPPVA
     NGGFICYGEY PNIQHNLQAL EDVWDYSYKH VPYYGTNTPI DECYECGFTG EFECTSKGFT
     CPKCGNHDAA RVSVTRRVCG YLGSPDARPF NAGKQEEVKR RVKHLGNGQI G
//