ID A0A085NB86_9BILA Unreviewed; 1379 AA.
AC A0A085NB86;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=procollagen-lysine 5-dioxygenase {ECO:0000256|ARBA:ARBA00012264};
DE EC=1.14.11.4 {ECO:0000256|ARBA:ARBA00012264};
GN ORFNames=M514_21081 {ECO:0000313|EMBL:KFD66732.1};
OS Trichuris suis (pig whipworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichuridae; Trichuris.
OX NCBI_TaxID=68888 {ECO:0000313|EMBL:KFD66732.1};
RN [1] {ECO:0000313|EMBL:KFD66732.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DCEP-RM93F {ECO:0000313|EMBL:KFD66732.1};
RX PubMed=24929829; DOI=10.1038/ng.3012;
RA Jex A.R., Nejsum P., Schwarz E.M., Hu L., Young N.D., Hall R.S.,
RA Korhonen P.K., Liao S., Thamsborg S., Xia J., Xu P., Wang S.,
RA Scheerlinck J.P., Hofmann A., Sternberg P.W., Wang J., Gasser R.B.;
RT "Genome and transcriptome of the porcine whipworm Trichuris suis.";
RL Nat. Genet. 46:701-706(2014).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-oxoglutarate + L-lysyl-[collagen] + O2 = (5R)-5-hydroxy-L-
CC lysyl-[collagen] + CO2 + succinate; Xref=Rhea:RHEA:16569, Rhea:RHEA-
CC COMP:12751, Rhea:RHEA-COMP:12752, ChEBI:CHEBI:15379,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:16810, ChEBI:CHEBI:29969,
CC ChEBI:CHEBI:30031, ChEBI:CHEBI:133442; EC=1.14.11.4;
CC Evidence={ECO:0000256|ARBA:ARBA00024166};
CC -!- COFACTOR:
CC Name=L-ascorbate; Xref=ChEBI:CHEBI:38290;
CC Evidence={ECO:0000256|ARBA:ARBA00001961};
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DR EMBL; KL367521; KFD66732.1; -; Genomic_DNA.
DR Proteomes; UP000030758; Unassembled WGS sequence.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0031418; F:L-ascorbic acid binding; IEA:UniProtKB-KW.
DR GO; GO:0008475; F:procollagen-lysine 5-dioxygenase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR InterPro; IPR044861; IPNS-like_FE2OG_OXY.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR InterPro; IPR005123; Oxoglu/Fe-dep_dioxygenase.
DR InterPro; IPR006620; Pro_4_hyd_alph.
DR InterPro; IPR002347; SDR_fam.
DR PANTHER; PTHR10730:SF45; PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE; 1.
DR PANTHER; PTHR10730; PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER; 1.
DR Pfam; PF03171; 2OG-FeII_Oxy; 1.
DR Pfam; PF00106; adh_short; 1.
DR SMART; SM00702; P4Hc; 1.
DR SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
DR SUPFAM; SSF53448; Nucleotide-diphospho-sugar transferases; 1.
DR PROSITE; PS51471; FE2OG_OXY; 1.
PE 4: Predicted;
KW Dioxygenase {ECO:0000256|ARBA:ARBA00022964};
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Iron {ECO:0000256|ARBA:ARBA00023004}; Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Vitamin C {ECO:0000256|ARBA:ARBA00022896}.
FT TRANSMEM 265..284
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 366..392
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1042..1148
FT /note="Fe2OG dioxygenase"
FT /evidence="ECO:0000259|PROSITE:PS51471"
SQ SEQUENCE 1379 AA; 158499 MW; 944C622F56B3FEEC CRC64;
MKASLWYWLS IFLLGEALKF VPLFRSYLIL RLLCWYVVSQ WIKRFVFKTC PFEVRFPDKE
HVVIVTGASA GIGTATAADL CARGGKVIWA ARDTAKAQRK LNDLAWTAHH GKRGYIIKLD
LASKKKIDQF VDEFKKREKN LHCLILNAAY WGPRRTTEDG FEQNFGVNHL GHMYLVYKLM
DVLKASAPSR VVVVGSDIHR LYSGVNFDDL MMERNYSAWR AYGHSKLCTI LFGRELARRL
EGTGITVSIA HPGTPVPSEL MRNSWAFWSI FHMFVLQPAF HLFCRTTMQG AQTTVYCACS
EECGKVTGNY YESVVHSFGQ FLTHILFKKR EEGLSERGGT RRCCCQTPMG YFLRDAENQR
KLDLNYFGYF LCWGYGAMCY FAAVLLALAF VADAEHLLVL TVATERTDGF LRTERSLLQF
SLNYRVLGLG TKWNGGDVRR TVGGGQKIRL LREALDQYKH EQDLVILFID GYDVIVNGDE
KLILERFLQT GAKVLFSAEG FCWPDKSLAV SYPVVKRGKR YLNSGAFIGY ASYIRKLLSE
GQVKDDGDDQ LFYTLVFLND KLREKYEIKL DSTAELFQNL NGAVDDVDLD LSPDPQSDPR
RGVRLANLAY SSEPLIVHGN GPSKVGFDRF FEECQLDFSK QIHLNMLGNY LGNWWNPSIG
CIACEEDELQ LDQDEEKWPF VVLASFITKP SPFVDLYFEN LLSLSYPKSR MGIYLYNGVE
NYTQIVADFR QEALKSFAFV ESPSITSGDE RFAFVKISTG SAADERQARD NAVQWCQERN
CDYLLVWDAN ARLERPDTLQ LLIKRNKPVV APLLHTEGRL WSNFWGAISD NGFYSRSDDY
VAIVERQRLG IWNVPYVTLL YLVRKERLSK MVNPYSYNMN ADADMSFCQY CREKDYFMYV
DNTVEYGHSV DDYGYDSTNS SSDLGNLLRN KKEWERKYLH KDYTNVLEDD YVLGMACPDV
YSFPIFSLAF CKDLIDTMEA YGKWSSGSHQ DSRLLGGYEN VPTRDIHMNQ VGLEPVWLKI
LDDYVRPVQE KAFTGYYSRP PKALMNFVVR YKPEEQASLR PHHDASTYTV DVALNKAGVD
YEGGGVRYVR YNCTARDLEP GWALMHPGRL THMHEVKVNH RMDGLHMRIG VYDCLPMLRW
SYCYLQVPLA FVIGFRVDKK MSAEQWTESK FIRTTKQAFL HARQLLDALS KIENSHLETI
DSIINQLMQK SCVEKADLSQ SQLRTIVGEH VSTFLLAKID KQVTNLCIAI KQDLEGCQQL
ADATKGYYGR LVEGYSVVGE DDRLHERLKR RTPKRPSILE MCSWLDDVLT TCRQELKDRQ
ELLARLALVR TEEAIEMLKH AKYCWKRPPS VVQRMNTHIA FTWHFVGEQN DQLQSALDE
//