ID A0A085NF50_9BILA Unreviewed; 204 AA.
AC A0A085NF50;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=U1-type domain-containing protein {ECO:0000259|SMART:SM00451};
DE Flags: Fragment;
GN ORFNames=M513_03433 {ECO:0000313|EMBL:KFD55685.1}, M514_03433
GN {ECO:0000313|EMBL:KFD68096.1};
OS Trichuris suis (pig whipworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichuridae; Trichuris.
OX NCBI_TaxID=68888 {ECO:0000313|EMBL:KFD68096.1};
RN [1] {ECO:0000313|EMBL:KFD68096.1, ECO:0000313|Proteomes:UP000030764}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DCEP-RM93F {ECO:0000313|EMBL:KFD68096.1}, and DCEP-RM93M
RC {ECO:0000313|EMBL:KFD55685.1};
RX PubMed=24929829; DOI=10.1038/ng.3012;
RA Jex A.R., Nejsum P., Schwarz E.M., Hu L., Young N.D., Hall R.S.,
RA Korhonen P.K., Liao S., Thamsborg S., Xia J., Xu P., Wang S.,
RA Scheerlinck J.P., Hofmann A., Sternberg P.W., Wang J., Gasser R.B.;
RT "Genome and transcriptome of the porcine whipworm Trichuris suis.";
RL Nat. Genet. 46:701-706(2014).
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DR EMBL; KL363198; KFD55685.1; -; Genomic_DNA.
DR EMBL; KL367508; KFD68096.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A085NF50; -.
DR Proteomes; UP000030758; Unassembled WGS sequence.
DR Proteomes; UP000030764; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR040107; Snu23.
DR InterPro; IPR022755; Znf_C2H2_jaz.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR45986; ZINC FINGER MATRIN-TYPE PROTEIN 2; 1.
DR PANTHER; PTHR45986:SF1; ZINC FINGER MATRIN-TYPE PROTEIN 2; 1.
DR Pfam; PF12171; zf-C2H2_jaz; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242}; Signal {ECO:0000256|SAM:SignalP};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT SIGNAL 1..28
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 29..204
FT /note="U1-type domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5007379626"
FT DOMAIN 114..148
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT REGION 165..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFD68096.1"
SQ SEQUENCE 204 AA; 23712 MW; BCFA851AF6478E6A CRC64;
KLWLTLLKFS SSPALFGFLC SEFCFTAADC CFRAMSNNAL PVVADDHRRK WDIGEYERLA
RERLEEEKRR EKEKSIPKDK VKRDILRPRD YKIDLDSKVG KSVVITKTTP ASEAGGYYCN
VCDCIVKDSI NFLDHINGKK HQRNMGMSMR VKKSTLDEER KLAEYKQQKR MRKRKIQQEE
SEDDEESELL AKTMGIKGFG TSKK
//
