ID A0A085TUX3_9RHOB Unreviewed; 318 AA.
AC A0A085TUX3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:KFE34520.1};
GN ORFNames=DW2_11735 {ECO:0000313|EMBL:KFE34520.1};
OS Thioclava atlantica.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Thioclava.
OX NCBI_TaxID=1317124 {ECO:0000313|EMBL:KFE34520.1, ECO:0000313|Proteomes:UP000028607};
RN [1] {ECO:0000313|Proteomes:UP000028607}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=13D2W-2 {ECO:0000313|Proteomes:UP000028607};
RA Lai Q., Li G., Shao Z.;
RT "Thioclava sp. 13D2W-2 Genome Sequencing.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KFE34520.1, ECO:0000313|Proteomes:UP000028607}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=13D2W-2 {ECO:0000313|EMBL:KFE34520.1,
RC ECO:0000313|Proteomes:UP000028607};
RX PubMed=25361528; DOI=10.1007/s10482-014-0320-3;
RA Liu Y., Lai Q., Du J., Xu H., Jiang L., Shao Z.;
RT "Thioclava indica sp. nov., isolated from surface seawater of the Indian
RT Ocean.";
RL Antonie Van Leeuwenhoek 107:297-304(2015).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFE34520.1}.
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DR EMBL; AQRC01000009; KFE34520.1; -; Genomic_DNA.
DR RefSeq; WP_038146785.1; NZ_AQRC01000009.1.
DR AlphaFoldDB; A0A085TUX3; -.
DR STRING; 1317124.DW2_11735; -.
DR PATRIC; fig|1317124.6.peg.2375; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 7506954at2; -.
DR Proteomes; UP000028607; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30419; HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD; 1.
DR PANTHER; PTHR30419:SF2; NITROGEN ASSIMILATION TRANSCRIPTIONAL ACTIVATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
FT DOMAIN 13..70
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 318 AA; 35797 MW; 2A6637C20F59871D CRC64;
MVKPYEQRFP WHLDWNLLRT FMVVVEQRGI SRAAYSLGLK QPTISAALKR LEETTGHELI
IRKPNEFSVT RAGNLLYQEC SQIFGSVSQL PSLLDSGAEE LRGHISIATT SHVISDHYDA
ILHDFATSHP KVTFSITVVE SEEVVSRVQQ NRASFGICLL HKIPANMKAS VLYREYFGLF
CGPRHRLFAR DEIALSEIEG ETSVSFQTET EEGPLYPVAL LRARAKLAPG WRGVSSNLHE
LRRMIVAGVG IGALPLHVAK RDVDSGRLRQ LPPYDDLPMV NIYLLTNPLR KQSDAEAAFL
DACHEAMRQT DLETRTYE
//
