ID A0A085VPZ0_PSESX Unreviewed; 87 AA.
AC A0A085VPZ0;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE RecName: Full=DNA-directed RNA polymerase subunit omega {ECO:0000256|ARBA:ARBA00013725, ECO:0000256|HAMAP-Rule:MF_00366};
DE Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418, ECO:0000256|HAMAP-Rule:MF_00366};
DE AltName: Full=RNA polymerase omega subunit {ECO:0000256|ARBA:ARBA00030998, ECO:0000256|HAMAP-Rule:MF_00366};
DE AltName: Full=Transcriptase subunit omega {ECO:0000256|ARBA:ARBA00029924, ECO:0000256|HAMAP-Rule:MF_00366};
GN Name=rpoZ {ECO:0000256|HAMAP-Rule:MF_00366};
GN ORFNames=BW686_10095 {ECO:0000313|EMBL:OUM07783.1}, CFBP3840_05214
GN {ECO:0000313|EMBL:SOS42219.1}, EIZ61_03075
GN {ECO:0000313|EMBL:QBI60557.1}, IV01_04060
GN {ECO:0000313|EMBL:KFE57503.1};
OS Pseudomonas syringae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=317 {ECO:0000313|EMBL:KFE57503.1, ECO:0000313|Proteomes:UP000028631};
RN [1] {ECO:0000313|EMBL:KFE57503.1, ECO:0000313|Proteomes:UP000028631}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GAW0119 {ECO:0000313|EMBL:KFE57503.1,
RC ECO:0000313|Proteomes:UP000028631};
RA Baltrus D.A., Berge O., Morris C.;
RT "Draft Genome Sequences of Environmental Pseudomonas syringae strains.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:OUM07783.1, ECO:0000313|Proteomes:UP000195128}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PDD-32b-74 {ECO:0000313|EMBL:OUM07783.1};
RA Mah S.A., Swanson W.J., Moy G.W., Vacquier V.D.;
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:SOS42219.1, ECO:0000313|Proteomes:UP000238095}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFBP3840 {ECO:0000313|EMBL:SOS42219.1};
RA Han C.G.;
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:QBI60557.1, ECO:0000313|Proteomes:UP000291230}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ps25 {ECO:0000313|EMBL:QBI60557.1,
RC ECO:0000313|Proteomes:UP000291230};
RX PubMed=30785360;
RA Mazo-Molina C., Mainiero S., Hind S.R., Kraus C.M., Vachev M.,
RA Maviane-Macia F., Lindeberg M., Saha S., Strickler S., Feder A.,
RA Giovannoni J., Smart C., Peeters N., Martin G.;
RT "The Ptr1 locus of Solanum lycopersicoides confers resistance to race 1
RT strains of Pseudomonas syringae pv. tomato and to Ralstonia
RT pseudosolanacearum by recognizing the type III effectors AvrRpt2/RipBN.";
RL Mol. Plant Microbe Interact. 0:0-0(2019).
CC -!- FUNCTION: Promotes RNA polymerase assembly. Latches the N- and C-
CC terminal regions of the beta' subunit thereby facilitating its
CC interaction with the beta and alpha subunits. {ECO:0000256|HAMAP-
CC Rule:MF_00366}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC ECO:0000256|HAMAP-Rule:MF_00366};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000256|HAMAP-Rule:MF_00366}.
CC -!- SIMILARITY: Belongs to the RNA polymerase subunit omega family.
CC {ECO:0000256|ARBA:ARBA00006711, ECO:0000256|HAMAP-Rule:MF_00366}.
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DR EMBL; JPQU01000018; KFE57503.1; -; Genomic_DNA.
DR EMBL; MTSA01000006; OUM07783.1; -; Genomic_DNA.
DR EMBL; CP034558; QBI60557.1; -; Genomic_DNA.
DR EMBL; LT963409; SOS42219.1; -; Genomic_DNA.
DR RefSeq; WP_002551500.1; NZ_WKDG01000018.1.
DR AlphaFoldDB; A0A085VPZ0; -.
DR SMR; A0A085VPZ0; -.
DR GeneID; 73733202; -.
DR PATRIC; fig|317.175.peg.860; -.
DR OrthoDB; 9796300at2; -.
DR Proteomes; UP000028631; Unassembled WGS sequence.
DR Proteomes; UP000195128; Unassembled WGS sequence.
DR Proteomes; UP000238095; Chromosome 1.
DR Proteomes; UP000291230; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:UniProtKB-UniRule.
DR Gene3D; 3.90.940.10; -; 1.
DR HAMAP; MF_00366; RNApol_bact_RpoZ; 1.
DR InterPro; IPR003716; DNA-dir_RNA_pol_omega.
DR InterPro; IPR006110; Pol_omega/Rpo6/RPB6.
DR InterPro; IPR036161; RPB6/omega-like_sf.
DR NCBIfam; TIGR00690; rpoZ; 1.
DR PANTHER; PTHR34476; DNA-DIRECTED RNA POLYMERASE SUBUNIT OMEGA; 1.
DR PANTHER; PTHR34476:SF1; DNA-DIRECTED RNA POLYMERASE SUBUNIT OMEGA; 1.
DR Pfam; PF01192; RNA_pol_Rpb6; 1.
DR SMART; SM01409; RNA_pol_Rpb6; 1.
DR SUPFAM; SSF63562; RPB6/omega subunit-like; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|HAMAP-Rule:MF_00366};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695, ECO:0000256|HAMAP-
KW Rule:MF_00366};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00366};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|HAMAP-
KW Rule:MF_00366}.
SQ SEQUENCE 87 AA; 9710 MW; FFB1B02ED2BB951F CRC64;
MARVTVEDCL EHVDNRFELV MLSTKRARQL ATGGKEPKLA WENDKPTVMA LREIAAGLMD
YAVIAEAEIV EDEPLFAAFE DESNEAV
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