ID A0A086BPB9_9BIFI Unreviewed; 1148 AA.
AC A0A086BPB9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Restriction/helicase domain protein {ECO:0000313|EMBL:KFF31783.1};
DE EC=3.1.21.3 {ECO:0000313|EMBL:KFF31783.1};
GN ORFNames=BBOMB_1185 {ECO:0000313|EMBL:KFF31783.1};
OS Bifidobacterium bombi DSM 19703.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=1341695 {ECO:0000313|EMBL:KFF31783.1, ECO:0000313|Proteomes:UP000028730};
RN [1] {ECO:0000313|EMBL:KFF31783.1, ECO:0000313|Proteomes:UP000028730}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19703 {ECO:0000313|EMBL:KFF31783.1,
RC ECO:0000313|Proteomes:UP000028730};
RX PubMed=25085493; DOI=10.1128/AEM.02308-14;
RA Milani C., Lugli G.A., Duranti S., Turroni F., Bottacini F., Mangifesta M.,
RA Sanchez B., Viappiani A., Mancabelli L., Taminiau B., Delcenserie V.,
RA Barrangou R., Margolles A., van Sinderen D., Ventura M.;
RT "Genomic encyclopedia of type strains of the genus Bifidobacterium.";
RL Appl. Environ. Microbiol. 80:6290-6302(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFF31783.1}.
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DR EMBL; ATLK01000001; KFF31783.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A086BPB9; -.
DR STRING; 1341695.BBOMB_1185; -.
DR eggNOG; COG1061; Bacteria.
DR eggNOG; COG3886; Bacteria.
DR OrthoDB; 9776021at2; -.
DR Proteomes; UP000028730; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0009035; F:type I site-specific deoxyribonuclease activity; IEA:UniProtKB-EC.
DR CDD; cd18032; DEXHc_RE_I_III_res; 1.
DR CDD; cd18799; SF2_C_EcoAI-like; 1.
DR Gene3D; 3.30.870.10; Endonuclease Chain A; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR021835; DUF3427.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR025202; PLD-like_dom.
DR PANTHER; PTHR47396:SF1; ATP-DEPENDENT HELICASE IRC3-RELATED; 1.
DR PANTHER; PTHR47396; TYPE I RESTRICTION ENZYME ECOKI R PROTEIN; 1.
DR Pfam; PF11907; DUF3427; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF13091; PLDc_2; 1.
DR Pfam; PF04851; ResIII; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF56024; Phospholipase D/nuclease; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:KFF31783.1};
KW Helicase {ECO:0000313|EMBL:KFF31783.1};
KW Hydrolase {ECO:0000313|EMBL:KFF31783.1};
KW Nucleotide-binding {ECO:0000313|EMBL:KFF31783.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000028730}.
FT DOMAIN 301..470
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 543..731
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1148 AA; 129069 MW; 1CFA650E5A9BA072 CRC64;
MSKNTPDAID THEVNDTAGS INRPLDDSLL EAVTAGFINR NPEADTSLTP ELIANRDGLT
MESALQDELH HCDDFDMSVA FVSAEALKSL FQDFLDFNEH QSRSKQYIAA SNGAELQDNQ
SHPALLKKPN TTPPLSGRIV TSTYNYFNSP DTFRMLLKIQ NQAHIEVRVW KGPDDRGNIN
TIESYPYHPK GYIFRKNEGS QELNNAYIGS SNLTQRALNL NKEWNLKVSA LRSSDLIRQI
GIEIDEQCQE SDLLTDAWIK EYEEEFKQHQ ITNTSSSQQT DKNTNIKPNA MQAEALMNLA
DLRRNGESRA LIISATGTGK TYLSAFDVKQ VHPQRMLYVA QQQQILDKSA QSYSRVLGKS
GNTFIMLSGD HKIDKSTVNN LMQKSKTTSA DGTTCVFSTI QTLSRPDVLS QFKPDDFDYI
LIDEAHHSAA SSYERITNYL KPDFLLGMTA TPERTDDADI FSIFGNNIAC EIRLQKALDE
DMLCPFHYYG VHEYLKEIPD DEPIPSSAVP NFENVDLTEG KQSDRTNLER ALADPNRVKY
IADMLQRYGD PSAPVCGLVF CSRQQEAIDL SAAFNEHINE QAERNYRTVA VTSGSRGMTR
DEAVTKLESG ELDYIFTVDL FNEGVDIPKL NQIVMLRPTQ SSIIFTQQLG RGLRKAPGKQ
SVTVIDFIGN YIKNNYLIPI ALYGNTGDRD VARKNLQRQT IGLSSISFDH IARDQVLKSL
DTVDLSDMKL LGIQYRQLRD ELNRIPMLTD FAKTDNSLVY TLASKKDSYL DFVRSREASL
SNGKHSSTAF IKQLEATNDT EDGALKMLTV TQLRGLRPHE LEALAKLCDI SFPNPSDTAL
RHDISKPLQP QENTTISVAE LQLLIQHDFP YADASLDQCQ SALNVLSYSY FTNPSRKRFG
EAPIIERVPA SMPTNSNVSD VMETNTGEYK LTDWFYNALL QNHTFATFLA DTVQAGLSNC
KTLYANLEPH APNLRETRGF IYGEKYSLAD VMRLCGWHNE QVAQNVGGYK FDTETNSMPI
FIKYEASQYG DRFLSTSDIR WFSKNQRSLT SSEFQWLLSG TADTNQSDWQ STHFVPVFIC
RKQDADSSKK APSYYFVGTV AKVTDMCESN NPPADENGKS SKVVISRLHL SHPVDPQLFK
HLTGRPAL
//
