ID A0A086HME2_STRSC Unreviewed; 238 AA.
AC A0A086HME2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=IclR family transcriptional regulator {ECO:0000313|EMBL:KFF99267.1};
DE SubName: Full=Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:GAQ66989.1};
GN Name=rhmR {ECO:0000313|EMBL:GAQ66989.1};
GN ORFNames=IQ62_19660 {ECO:0000313|EMBL:KFF99267.1}, SsS58_07434
GN {ECO:0000313|EMBL:GAQ66989.1};
OS Streptomyces scabiei.
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces.
OX NCBI_TaxID=1930 {ECO:0000313|EMBL:KFF99267.1, ECO:0000313|Proteomes:UP000028722};
RN [1] {ECO:0000313|EMBL:KFF99267.1, ECO:0000313|Proteomes:UP000028722}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCPPB 4086 {ECO:0000313|EMBL:KFF99267.1,
RC ECO:0000313|Proteomes:UP000028722};
RA Harrison J., Sapp M., Thwaites R., Studholme D.J.;
RT "Genome sequencing of plant-pathogenic Streptomyces species.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000067448}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S58 {ECO:0000313|Proteomes:UP000067448};
RG Cross-ministerial Strategic Innovation Promotion Program (SIP) consortium;
RA Tomihama T., Ikenaga M., Sakai M., Okubo T., Ikeda S.;
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:GAQ66989.1, ECO:0000313|Proteomes:UP000067448}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S58 {ECO:0000313|EMBL:GAQ66989.1,
RC ECO:0000313|Proteomes:UP000067448};
RA Tomihama T., Nishi Y., Sakai M., Ikenaga M., Okubo T., Ikeda S.;
RT "Draft Genome Sequences of Streptomyces scabiei S58, Streptomyces
RT turgidiscabies T45, and Streptomyces acidiscabies a10, the Pathogens of
RT Potato Common Scab, Isolated in Japan.";
RL Genome Announc. 4:e00062-16(2016).
RN [4] {ECO:0000313|Proteomes:UP000067448}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S58 {ECO:0000313|Proteomes:UP000067448};
RA Tomihama T., Ikenaga M., Sakai M., Okubo T., Ikeda S.;
RT "Draft genome of pathogenic Streptomyces sp. in Japan.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFF99267.1}.
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DR EMBL; BCMM01000048; GAQ66989.1; -; Genomic_DNA.
DR EMBL; JPPX01000125; KFF99267.1; -; Genomic_DNA.
DR RefSeq; WP_003993203.1; NZ_MVNU01000479.1.
DR AlphaFoldDB; A0A086HME2; -.
DR GeneID; 85837220; -.
DR OrthoDB; 4319317at2; -.
DR Proteomes; UP000028722; Unassembled WGS sequence.
DR Proteomes; UP000067448; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF39; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 7..66
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 67..236
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 238 AA; 24962 MW; 2D1C3FD98FAE9EA5 CRC64;
MDNSSGVGVL DKAALVLSAL ESGPATLAGL VGATGLARPT AHRLAVALEH HRMVARDMQG
RFILGPRLAE LAAAAGEDRL LATAGPVLTH LRDITGESAQ LYRRQGDMRI CVAAAERLSG
LRDTVPVGST LTMKAGSSAQ ILMAWEEPER LHRGLQGARF TATALSGVRR RGWAQSIGER
EPGVASVSAP VRGPSNRVVA AVSVSGPIER LTRHPGRMHA QAVIDAAGRL SEALRRTG
//
