GenomeNet

Database: UniProt
Entry: A0A086YZR1_9BIFI
LinkDB: A0A086YZR1_9BIFI
Original site: A0A086YZR1_9BIFI 
ID   A0A086YZR1_9BIFI        Unreviewed;       158 AA.
AC   A0A086YZR1;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   RecName: Full=Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440};
GN   Name=nrdR {ECO:0000256|HAMAP-Rule:MF_00440};
GN   ORFNames=BACT_0461 {ECO:0000313|EMBL:KFI39761.1};
OS   Bifidobacterium actinocoloniiforme DSM 22766.
OC   Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC   Bifidobacteriaceae; Bifidobacterium.
OX   NCBI_TaxID=1437605 {ECO:0000313|EMBL:KFI39761.1, ECO:0000313|Proteomes:UP000029015};
RN   [1] {ECO:0000313|EMBL:KFI39761.1, ECO:0000313|Proteomes:UP000029015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 22766 {ECO:0000313|EMBL:KFI39761.1,
RC   ECO:0000313|Proteomes:UP000029015};
RA   Ventura M., Milani C., Lugli G.A.;
RT   "Genomics of Bifidobacteria.";
RL   Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Negatively regulates transcription of bacterial
CC       ribonucleotide reductase nrd genes and operons by binding to NrdR-
CC       boxes. {ECO:0000256|HAMAP-Rule:MF_00440}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_00440};
CC       Note=Binds 1 zinc ion. {ECO:0000256|HAMAP-Rule:MF_00440};
CC   -!- SIMILARITY: Belongs to the NrdR family. {ECO:0000256|HAMAP-
CC       Rule:MF_00440}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KFI39761.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JGYK01000001; KFI39761.1; -; Genomic_DNA.
DR   RefSeq; WP_033504628.1; NZ_JGYK01000001.1.
DR   AlphaFoldDB; A0A086YZR1; -.
DR   STRING; 1437605.AB656_00930; -.
DR   KEGG; bact:AB656_00930; -.
DR   PATRIC; fig|1437605.7.peg.186; -.
DR   eggNOG; COG1327; Bacteria.
DR   OrthoDB; 9807461at2; -.
DR   Proteomes; UP000029015; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_00440; NrdR; 1.
DR   InterPro; IPR005144; ATP-cone_dom.
DR   InterPro; IPR003796; RNR_NrdR-like.
DR   NCBIfam; TIGR00244; transcriptional regulator NrdR; 1.
DR   PANTHER; PTHR30455; TRANSCRIPTIONAL REPRESSOR NRDR; 1.
DR   PANTHER; PTHR30455:SF2; TRANSCRIPTIONAL REPRESSOR NRDR; 1.
DR   Pfam; PF03477; ATP-cone; 1.
DR   PROSITE; PS51161; ATP_CONE; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|HAMAP-
KW   Rule:MF_00440};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|HAMAP-
KW   Rule:MF_00440}; Metal-binding {ECO:0000256|HAMAP-Rule:MF_00440};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|HAMAP-
KW   Rule:MF_00440}; Reference proteome {ECO:0000313|Proteomes:UP000029015};
KW   Repressor {ECO:0000256|ARBA:ARBA00022491, ECO:0000256|HAMAP-Rule:MF_00440};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW   Rule:MF_00440};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW   Rule:MF_00440}; Zinc {ECO:0000256|HAMAP-Rule:MF_00440};
KW   Zinc-finger {ECO:0000256|HAMAP-Rule:MF_00440}.
FT   DOMAIN          46..136
FT                   /note="ATP-cone"
FT                   /evidence="ECO:0000259|PROSITE:PS51161"
FT   ZN_FING         3..34
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00440"
SQ   SEQUENCE   158 AA;  17923 MW;  9F8C97A00A7BB1D4 CRC64;
     MHCPFCQNPD TKVVDTRISD DGYAIRRRRE CPRCSRRFTT IETSALLVKK HSGNSEPFNR
     DKVIAGVRKA CQGRHIEEDA LKQLGQQVEE DLRSRGLAQV DSEEVGKAIL GPLRKLDEVA
     YLRFASVYQS FNGLEDFQRA IDELKAEDEA DLQVAEGR
//
DBGET integrated database retrieval system