ID A0A087DJ03_9BIFI Unreviewed; 418 AA.
AC A0A087DJ03;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Putative DeoR family transcriptional regulator {ECO:0000313|EMBL:KFI95503.1};
GN ORFNames=BSCA_0534 {ECO:0000313|EMBL:KFI95503.1};
OS Bifidobacterium scardovii.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=158787 {ECO:0000313|EMBL:KFI95503.1, ECO:0000313|Proteomes:UP000029033};
RN [1] {ECO:0000313|EMBL:KFI95503.1, ECO:0000313|Proteomes:UP000029033}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 21589 {ECO:0000313|EMBL:KFI95503.1,
RC ECO:0000313|Proteomes:UP000029033};
RA Ventura M., Milani C., Lugli G.A.;
RT "Genomics of Bifidobacteria.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFI95503.1}.
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DR EMBL; JGZO01000002; KFI95503.1; -; Genomic_DNA.
DR RefSeq; WP_033517131.1; NZ_JGZO01000002.1.
DR AlphaFoldDB; A0A087DJ03; -.
DR STRING; 158787.BSCA_0534; -.
DR GeneID; 85166680; -.
DR eggNOG; COG1609; Bacteria.
DR OrthoDB; 3252280at2; -.
DR Proteomes; UP000029033; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR018356; Tscrpt_reg_HTH_DeoR_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30146:SF121; HTH-TYPE TRANSCRIPTIONAL REPRESSOR CYTR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF08220; HTH_DeoR; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00037; HTHLACR.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS00894; HTH_DEOR_1; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000029033};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 39..94
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
FT REGION 1..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 97..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 99..117
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 418 AA; 45408 MW; B37133A01CC1FCD8 CRC64;
MTEHSNPTAS TSAAQTRATA RRTAPAAPAA GERKRDYLPA ERQDMILSLL TRQSVATVPE
LAKLLNTTEI TVRRDLTVLS DAGLLKRIRG GAMSVTDADS PLSPITQQPT AALSERSPSG
AITVKPVPHG PELGSDQPAI GVMLPEPSFF WPGVIEHMRT IASRLGLRIL TRESTYDADV
REDDILEDLS SDPTVCGLIV APNSHPECGK YTWDWISRSE TPTVVIERDQ PMLGSRFVDS
VRTNHPYGVR KAAVHFLSHG HTRIGTAFSD TPTSTMIQEG WHEIVDSTDA IDCPFVIDGI
QPYDTKGVNG IVDTILESGV TAMLVHSDYL AIAIAQTLER RGKRVPDDVS LISVDGFATP
SSRPLTVLRS SDRDLAEVAI RTLLDRIQNP DAATRHVLVD PTLIDRGSVV DIRQRPAA
//
