ID   A0A087FXA3_ARAAL        Unreviewed;       658 AA.
AC   A0A087FXA3;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   27-MAR-2024, entry version 34.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   ORFNames=AALP_AAs66747U001000 {ECO:0000313|EMBL:KFK22255.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK22255.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC       {ECO:0000256|ARBA:ARBA00006643}.
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DR   EMBL; KL990937; KFK22255.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087FXA3; -.
DR   EnsemblPlants; KFK22255; KFK22255; AALP_AAs66747U001000.
DR   Gramene; KFK22255; KFK22255; AALP_AAs66747U001000.
DR   eggNOG; KOG4197; Eukaryota.
DR   OMA; MPFKPHP; -.
DR   OrthoDB; 464681at2759; -.
DR   Proteomes; UP000029120; Unassembled WGS sequence.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 9.
DR   PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF12854; PPR_1; 2.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 5.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          125..159
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          187..221
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          250..284
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          320..350
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          351..385
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          566..658
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   658 AA;  74666 MW;  F78F100B9935E4BA CRC64;
     MLSRYTVRAS YKLCKFRFFS SYVENPEAIS KCSSSSTSCS SPEPSLGCSN NLTITKPFDQ
     DEIFSLNKVI ARCVRSGDLD GALRVFHGMR MKNTVTWNSL LVGLTKDPSR IKEAQQLFDE
     IPEPDTFSYN IMLSCYIRNG NFDKARRFFE QTPVKDAASW NTMITGYSRR SEMEKARELF
     YEMTVKNEVS WNAMISGYVE CGDLEMALHF FKATPFRGVV AWTAMITGYM KAKKVELAEA
     MFTDMSVKRN LVTWNAMISG YVENSRPEDG LKLFKAMLND GIRPNASGLS SVLLGCSELS
     ALRLGRQIHQ LVCKSTLGND VTALTSLISM YCKCGDLGDA WKLFEAMKMK DVVAWNAMIS
     GYAQHGKAEK ALFLFGEMRD SKIRPDWITF VAVLLACNHA GLVDIGMEYF DSMVRDYGVE
     PRADHYTCMV DLLGRAGKLE EALKLIKSMP FKPHAAVYGT LLGACRVHKN VELAEFASTK
     LLELDPRNAA GYVQLANMYA SKNLWEEVAK VRKRMKQSNV VKVPGYSWME IQNKIHHFRS
     SDRIHPELDS IHKKLKELEK KVKLAGYTPV LEFALHDVEI EQKEKLLLWH SEKLAVAFGC
     LKLPEGSRIQ VFKNLRICGD CHKAIKFISE IEKREIIVRD TTRFHHFKDG SCSCGDYW
//