ID A0A087G448_ARAAL Unreviewed; 509 AA.
AC A0A087G448;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=LIMR family protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=AALP_Aa8g007300 {ECO:0000313|EMBL:KFK24650.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK24650.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CM002876; KFK24650.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087G448; -.
DR SMR; A0A087G448; -.
DR EnsemblPlants; KFK24650; KFK24650; AALP_AA8G007300.
DR Gramene; KFK24650; KFK24650; AALP_AA8G007300.
DR eggNOG; ENOG502QPKQ; Eukaryota.
DR OMA; YYEAYDP; -.
DR OrthoDB; 5471657at2759; -.
DR Proteomes; UP000029120; Chromosome 8.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006876; LMBR1-like_membr_prot.
DR PANTHER; PTHR31652; LIMR FAMILY PROTEIN DDB_G0283707-RELATED; 1.
DR PANTHER; PTHR31652:SF0; LIMR FAMILY PROTEIN DDB_G0283707-RELATED; 1.
DR Pfam; PF04791; LMBR1; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 40..60
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 90..111
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 123..148
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 207..240
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 332..354
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 374..402
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 422..447
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 475..494
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT COILED 256..310
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 509 AA; 56570 MW; 3F46374A29D82F45 CRC64;
MGDFNLALVI VAIVVCVIVF ISSIYLLVNY QHPDDANQAY FPKFVVVFGL SIAMISILML
PADVANRHAC RHSIYNGACN LTLPMKDLWL AVYIVDAILV FFIIPFAMFF YEGDQDKTLG
KRIKSALIWV VTTAVVCALV LGILYGVIGK VDFSVRHLSS ATTTFPTSWQ FSNNQPCIGN
TARQCSAYTA NAASEKTWTM RTTFPEYVVA LATIVGSVLF TIFGGVGIAS LPLGLITAFI
RRPKAVITRS QYIKEATELG KKARELKKAA DSLHQEERSG AKGRKWRKNV KAVEKELLQL
EEDVNLLEEV YPQGEKAETA WAFTVLGYLA KFILGILGLI VSVAWIAHII IYLLVDPPLS
PFLNEVFIKL DDVWGLLGTA AFAFFCFYLL LAVIAGAMML GLKLIFITIH PMKWGATLMN
SFLFNVGLIL LCSISVIQFC ATAFGYYAQA TAAQEIFGHT LQSLRGIKYL YKYNVFQIGF
VVLAGLTFIY YIAFGWRRKK PSGRFQLST
//
