ID A0A087G4D2_ARAAL Unreviewed; 868 AA.
AC A0A087G4D2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN OrderedLocusNames=AALP_Aa8g017500 {ECO:0000313|EMBL:KFK24734.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK24734.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM002876; KFK24734.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087G4D2; -.
DR EnsemblPlants; KFK24734; KFK24734; AALP_AA8G017500.
DR Gramene; KFK24734; KFK24734; AALP_AA8G017500.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; CGDYLKS; -.
DR OrthoDB; 35426at2759; -.
DR Proteomes; UP000029120; Chromosome 8.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF17; OS12G0638900 PROTEIN; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 2.
DR Pfam; PF17177; PPR_long; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 274..308
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 321..479
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 342..372
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 381..415
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 416..450
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 565..599
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 600..634
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 635..672
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 21..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..68
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 868 AA; 96786 MW; E07A63D7FCE22CA1 CRC64;
MRNFVIVFSF SSSVITNPHH RHNHRRCYAA APEPNRKTKS TSSLTKQLQS LPQQQSASSS
SSSSPLSSSA NPFSNHFSDA VRWIPDGSVE YYADFASKLA EDGRIQDVAL IAETLAAESG
ANVARFASMV DSELLSKGIS LNLRQGKIEI VVYTLKRIEK VGIAPLDLVD ESSVKLMRRQ
FRAMANSVLV EKAIDLMEIL AGFGFKIKDL VDPFDVVKIC VDISNPQLAI RYACLLPHTE
ILLCRIIHGF GKKGDMVSVM TAYEACKEIL DTPNMYIYRT MIDVCGLCGD YVKSRYIYED
LLKENIKPNI YVMNSLMNVN SHDLGYTVKI YKNMQKLDVI ADMTSYNILL KTCCLAGRVD
LAQDIYKEAK RMESSGLLKL DAFTYCTIIK VFADAKMWKM ALKVKEDMQS VGVTPNTHTW
SSLISACANA GLVEQANQLF EEMLASGGEP NSQCFNILLH ACVEACQYDR AFRLFQSWKG
SSAKEALYTD DIVSKGGSFS PNNLENHGSG SLVNSNSSPY IQASNRFFFK PTTATFNILL
KACGTDYYRA KELMEEMKSL GLAPNQITWS TLIDICGGSG DVEGAVRILR IMHSAGTRPD
VVAYTTAIKI CAENKSLKLA FSLFEEMRRY QIKPNWVTYN TLLKARSKYG SLLEVRQCLA
IYQDMRKAGY KPNDHFLKEL IEEWCEGVIQ ENGQSQDKII DQEGTDLGRP VSLLFEKVAT
HLQERTAGNL AIDLQGLTKV EARLVVLAVL RMIKEDYMRG DVVTDDVVII LGTGEANTDS
GKQESAVKDV LVKLLKDELS LVVLPAGQRH LIDITQDAQL VDDGNQDPEH TSENTISIVG
ISSTRRPAIL ERLMVTKASL RRWLQRKK
//
