ID A0A087GEM2_ARAAL Unreviewed; 528 AA.
AC A0A087GEM2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=AALP_Aa8g501200 {ECO:0000313|EMBL:KFK28324.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK28324.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002876; KFK28324.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087GEM2; -.
DR EnsemblPlants; KFK28324; KFK28324; AALP_AA8G501200.
DR Gramene; KFK28324; KFK28324; AALP_AA8G501200.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; HARPCAA; -.
DR OrthoDB; 455000at2759; -.
DR Proteomes; UP000029120; Chromosome 8.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 144..178
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 341..375
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 378..408
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 528 AA; 58101 MW; 83DA0B4DF383B020 CRC64;
MFVCLPRLGD VTGKSTSLLL RYVFVRNFVA HADNLFDELP QRDLSSLNSQ LSSYQRSGNS
NGTLALFLNM HRASPDLDSH TFTPVLGACA QLSYPETGRQ VHALMIKKGA DTGTISKTAL
INMYSKYGRL VDSVTVFKSV EEKDVVSWNA LLSGFLRNGK SKEALGVFAA MCSEKVEISE
FTLCSVVKTC ASLKILQQGK QVHAMVVVTG RDLVVLGTAM ISFYSSVGLM SEAMKVYMSL
NVHTDEVMLN SMISGCIRNR KYKEAFLLMS RQTPNVRVLI SSLAGCSDNS DMWIGKQIHC
VALRNGFVSD SKLCNGLLDM YGKCGQIVQA RTLFRAIPSK SVVSWTSMIG AYAVNGDGVK
ALEIFREMCE EGSGVLPNSV TFLVVLSACA HAGLVEEGKQ CFRMMKEKYR LVPGTEHYVC
FIDILSKAGD TEEIWRLVER MMQQNSNQNL PCAIWVAVLS ACSLNMDVTR GEYAVRKLME
ETGAENASIY VLVSNFYAAI GKWGMVEELR GKMNKKGLVK AAGHSSFI
//
