ID   A0A087GIZ9_ARAAL        Unreviewed;       646 AA.
AC   A0A087GIZ9;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   OrderedLocusNames=AALP_Aa7g187000 {ECO:0000313|EMBL:KFK29851.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK29851.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
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DR   EMBL; CM002875; KFK29851.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087GIZ9; -.
DR   EnsemblPlants; KFK29851; KFK29851; AALP_AA7G187000.
DR   Gramene; KFK29851; KFK29851; AALP_AA7G187000.
DR   eggNOG; KOG4197; Eukaryota.
DR   OMA; HGQRCHS; -.
DR   OrthoDB; 608851at2759; -.
DR   Proteomes; UP000029120; Chromosome 7.
DR   GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR   GO; GO:1905639; P:positive regulation of mitochondrial mRNA catabolic process; IEA:EnsemblPlants.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR47928:SF210; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ELI1, CHLOROPLASTIC; 1.
DR   PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 2.
DR   Pfam; PF13812; PPR_3; 1.
DR   PROSITE; PS51375; PPR; 5.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          122..157
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          320..354
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          422..456
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          457..492
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          559..593
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   646 AA;  71931 MW;  7EDBEAA4A51A8E49 CRC64;
     MTLLSYLHYT PSKSFLFQRF CSHSKIAHKL FDGSSQRNAT TFINHSISDS LRRNSPAQAL
     AIFKENLQLG CSGCTMDELH STVVKSGLEC DVIVGNSFIT MYSRDGSFRD AKRVFDGMLV
     KDMISWNSLL SGLSQGGNFG LEAVVVFREM MREGVELDHV SFTSVITTCC HETDLKLARQ
     IHGLCLKRGY ETLVPVGNML LSSYWKCGVL EAAKSVFYQM SERNVISWTT MISADKDDAV
     SIFHEMRLDG VCPNEVTFVG LINAVKCNEQ IKEGLKIQGI CIKSGFASKS SIGNSFITMY
     AKFEALEDAK KAFDEIHFRE IISWNAMISG FAQNGFAHEA LKMFLSAVTE TVPNEYTFGS
     VLNAIASAED ISLKHGQRCH ARILKLGLYS CPVVSSALLD MYAKRGSITE SEKVFNEMSA
     RNQFVWTSII SAYSSHGDFE SVMNSFQEMV KENIAPDLIT FLSVLTACNR KGMVDKGYEI
     FNSMTKDYNL EPSHEHYSCM VDMLGRAGRL KEAEELMSEV PGGPGVSMLQ SMLGSCRLHG
     NVKMGANMAE LAMEMKPELS GSYVLMYNLY AEKGQWDKAA EIRKEMKKKG VRKEGGFSWI
     DLSDTEGSLT MQGFSSGDKS HPKSDEIYRM VEILGLEMSL ERKVAV
//