ID A0A087GMQ1_ARAAL Unreviewed; 509 AA.
AC A0A087GMQ1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=AALP_Aa6g075300 {ECO:0000313|EMBL:KFK31153.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK31153.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM002874; KFK31153.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087GMQ1; -.
DR EnsemblPlants; KFK31153; KFK31153; AALP_AA6G075300.
DR Gramene; KFK31153; KFK31153; AALP_AA6G075300.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; MIYDVME; -.
DR OrthoDB; 311940at2759; -.
DR Proteomes; UP000029120; Chromosome 6.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR47933:SF32; OS06G0111300 PROTEIN; 1.
DR PANTHER; PTHR47933; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 11.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 108..142
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 143..177
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 178..212
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 213..247
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 248..282
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 283..317
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 318..352
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 353..387
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 388..422
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 423..457
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 458..492
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 509 AA; 58480 MW; 913E421FCB7A55A4 CRC64;
MRSLLNSIVT DEFYNKGLVS AMKSLDFEDY LEEKFGFCES FLDLVFRVYV DNGMFEEGLR
VFDYMVKKGL SLDERSCIVF LVAAKKRRRI DLCLEIFRRM VVSGVKITVY SLTIVVEGLC
RRGEVDKSRR LIKEFSSKGI RFEAYTYNTI LNAYVKERDF EGVDEVLKVM KKEGVKYTKV
TYTVLMEFSV KNGRMVDAEK LFEEMRESGI ESDVHVYTSL ISWNCRKGDM KRAFLLFDEL
IEKGLSPTSY TYGALIDGVC KVGEMGAAEI LMNEMQSRGV DMTRVVFNTL INGYCRKGMI
DEALMIYDVM EKKGFQADEF SFNTIASCFN RLKRYDEAKQ WLFKMMEAGV RFNTVSYTNL
IDVYCKEGNI DEAKRLFVEM SSKGEQPNAF TYNVMIYAYC KQGKMKEARK LRANMEAKGM
KPDSYTYTSL IHGECIADNV DEAMRLYGEM GSKGLDQNSV TYTVMISGLS KAGKSDEAFR
LYDEMKRKGH NIDNKVYTAL IGSMHSSET
//
