ID A0A087GR38_ARAAL Unreviewed; 314 AA.
AC A0A087GR38;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};
GN OrderedLocusNames=AALP_Aa6g228900 {ECO:0000313|EMBL:KFK32340.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK32340.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM002874; KFK32340.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087GR38; -.
DR EnsemblPlants; KFK32340; KFK32340; AALP_AA6G228900.
DR Gramene; KFK32340; KFK32340; AALP_AA6G228900.
DR eggNOG; ENOG502QSJP; Eukaryota.
DR OMA; CDFNSEL; -.
DR OrthoDB; 620070at2759; -.
DR Proteomes; UP000029120; Chromosome 6.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0031326; P:regulation of cellular biosynthetic process; IEA:UniProt.
DR GO; GO:0034756; P:regulation of iron ion transport; IEA:EnsemblPlants.
DR GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR GO; GO:0010039; P:response to iron ion; IEA:EnsemblPlants.
DR CDD; cd11450; bHLH_AtFIT_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR PANTHER; PTHR31945:SF17; TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR31945; TRANSCRIPTION FACTOR SCREAM2-RELATED; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 122..171
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 88..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..132
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 314 AA; 34891 MW; 1CAE928CBB84308A CRC64;
MEGRVNALSN VNDLELHNLL VDPNFDQFIN LIRGDQTIQD PLLDFDLGPL QSSPCFIDEN
QFIPTPVDDL FDELPDLDSN VAESFRSFDG DSVRAGGDDD YNDGDDSSAT TTNNDGSRKT
KTDRSRTLIS ERRRRGRMKD KLYALRSLVP NITKMDKASI VGDAVLYVQE LQSQAKKLKA
DIAGLEASLN STGGYEELAP DAHKTQPFRG ISPPLSKKII QMDVIQVEEK GFYVRLVCNK
GEGVAPSLYK SLESLTTFQV QNSNLSSPSS DKYLLTYTLD GTCFEQSLNL PNLKLWITGS
LLNQGFEFVK PFTS
//
