GenomeNet

Database: UniProt
Entry: A0A087GU23_ARAAL
LinkDB: A0A087GU23_ARAAL
Original site: A0A087GU23_ARAAL 
ID   A0A087GU23_ARAAL        Unreviewed;       652 AA.
AC   A0A087GU23;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 40.
DE   RecName: Full=Calponin-homology (CH) domain-containing protein {ECO:0000259|PROSITE:PS50021};
GN   OrderedLocusNames=AALP_Aa5g005200 {ECO:0000313|EMBL:KFK33375.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK33375.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
CC   -!- SUBUNIT: Interacts with F-actin. {ECO:0000256|ARBA:ARBA00011385}.
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DR   EMBL; CM002873; KFK33375.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087GU23; -.
DR   EnsemblPlants; KFK33375; KFK33375; AALP_AA5G005200.
DR   Gramene; KFK33375; KFK33375; AALP_AA5G005200.
DR   eggNOG; KOG0046; Eukaryota.
DR   OMA; WQLMRKN; -.
DR   OrthoDB; 5475188at2759; -.
DR   Proteomes; UP000029120; Chromosome 5.
DR   GO; GO:0051015; F:actin filament binding; IEA:InterPro.
DR   GO; GO:0051017; P:actin filament bundle assembly; IEA:EnsemblPlants.
DR   CDD; cd21293; CH_AtFIM_like_rpt1; 1.
DR   CDD; cd21299; CH_AtFIM_like_rpt3; 1.
DR   Gene3D; 1.10.418.10; Calponin-like domain; 4.
DR   InterPro; IPR001589; Actinin_actin-bd_CS.
DR   InterPro; IPR001715; CH_dom.
DR   InterPro; IPR036872; CH_dom_sf.
DR   InterPro; IPR011992; EF-hand-dom_pair.
DR   InterPro; IPR039959; Fimbrin/Plastin.
DR   PANTHER; PTHR19961:SF18; FI19014P1; 1.
DR   PANTHER; PTHR19961; FIMBRIN/PLASTIN; 1.
DR   Pfam; PF00307; CH; 4.
DR   SMART; SM00033; CH; 4.
DR   SUPFAM; SSF47576; Calponin-homology domain, CH-domain; 1.
DR   SUPFAM; SSF47473; EF-hand; 1.
DR   PROSITE; PS00020; ACTININ_2; 1.
DR   PROSITE; PS50021; CH; 4.
PE   4: Predicted;
KW   Actin-binding {ECO:0000256|ARBA:ARBA00023203};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   DOMAIN          124..241
FT                   /note="Calponin-homology (CH)"
FT                   /evidence="ECO:0000259|PROSITE:PS50021"
FT   DOMAIN          269..372
FT                   /note="Calponin-homology (CH)"
FT                   /evidence="ECO:0000259|PROSITE:PS50021"
FT   DOMAIN          394..500
FT                   /note="Calponin-homology (CH)"
FT                   /evidence="ECO:0000259|PROSITE:PS50021"
FT   DOMAIN          515..623
FT                   /note="Calponin-homology (CH)"
FT                   /evidence="ECO:0000259|PROSITE:PS50021"
FT   REGION          631..652
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   652 AA;  73580 MW;  7090CF1422DFB7E1 CRC64;
     MSGFVGILVS DPWLHNQFTQ VELRSLKSHF TSMRRESGKL TVSDLASRMG KSKVVGDQNL
     TVEERSSLIQ SFHPNSNDEV DFEFYLRIYL HLQAHVNAII GSGVKNSSAF LKAATTTLLH
     TISDSEKSSY VAHINSYLSG DEFLNKYLPI NPCSNDLFEV AKDGVLLCKL INVAVPGTID
     ERAINTKSML NPWERNENHT LCLNSAKAIG CTVVNIGTQD IIEGRRHLVL GVISQIIKIQ
     LLADLNLKKT PQLVELVDDS KDVEELLSLP PEKILLRWMN FQLKKSEYKK TVTNFSSDVK
     DAEAYTNLLN VLAPEHKNPS NLVAKHPFER AKHVLEHADR MGCRRYLTAK DIVEGSPNLN
     LAFVAHIFQH RNGLSTQTKQ ISFLETLADD TQISREERSF RFWINSFDSS LYINNVFEDL
     RDGWILLQTV EKVSPGIVNW KIASKPPIKL PFKKVENCNQ VVKLGKQLKF SLVNIAGNDI
     VQGNKKLILA YLWQLMRYNI LQLLKNLRSH SNGKEITDVD ILDWANGKVR KNGSQTRMYS
     FRDKSLSDGI FFLELLSSVQ PRVVNWSLVT NGVTDEEKKM NATYVISIAR KLGCSIFLLP
     EDIIEVNQKM MLTLTASIMY WTLKQPCHLT GSPDTHSSGS LLDDSTSDSS LE
//
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