GenomeNet

Database: UniProt
Entry: A0A087GVX5_ARAAL
LinkDB: A0A087GVX5_ARAAL
Original site: A0A087GVX5_ARAAL 
ID   A0A087GVX5_ARAAL        Unreviewed;       378 AA.
AC   A0A087GVX5;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   27-MAR-2024, entry version 26.
DE   RecName: Full=F-box domain-containing protein {ECO:0000259|SMART:SM00256};
GN   OrderedLocusNames=AALP_Aa5g092400 {ECO:0000313|EMBL:KFK34027.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK34027.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
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DR   EMBL; CM002873; KFK34027.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087GVX5; -.
DR   EnsemblPlants; KFK34027; KFK34027; AALP_AA5G092400.
DR   Gramene; KFK34027; KFK34027; AALP_AA5G092400.
DR   OMA; SCNQPKA; -.
DR   OrthoDB; 687429at2759; -.
DR   Proteomes; UP000029120; Chromosome 5.
DR   InterPro; IPR006527; F-box-assoc_dom_typ1.
DR   InterPro; IPR017451; F-box-assoc_interact_dom.
DR   InterPro; IPR036047; F-box-like_dom_sf.
DR   InterPro; IPR001810; F-box_dom.
DR   InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR   NCBIfam; TIGR01640; F_box_assoc_1; 1.
DR   PANTHER; PTHR47993:SF349; F-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47993; OS09G0372900 PROTEIN-RELATED; 1.
DR   Pfam; PF00646; F-box; 1.
DR   Pfam; PF07734; FBA_1; 1.
DR   SMART; SM00256; FBOX; 1.
DR   SUPFAM; SSF81383; F-box domain; 1.
DR   SUPFAM; SSF50965; Galactose oxidase, central domain; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120}.
FT   DOMAIN          7..47
FT                   /note="F-box"
FT                   /evidence="ECO:0000259|SMART:SM00256"
SQ   SEQUENCE   378 AA;  43143 MW;  4C79B95066A2B40E CRC64;
     MTKLSDLTDD LVGEILSRVT LTSLIAVRST CKLWNALSKK LILGKRAESR KQQFLEFIKI
     SSRVCSMKFD RKGIRNEEEE FIDPSTKQVS VFDGIRVSQI FCCDGLLLCV PMEEDDSITR
     VIVWNPYLGQ IRWIEPRTKF GRYDGFALGF DNNGNHKILR SVYERGICID DVYDFSTDSW
     RVLDISPDSK ELCFSNGVSL KGNAYLFDEE LTTVETEEAD TVEVDYLVCF DFTTERFGPR
     LSLPFHPPYP SIETLTLSSV RDEKLSVLYQ HGNTFDIVEI WVTTKIEPNV VSWSKFLRVD
     MSLINGLPDD FKARCFFSDE EKKVAVVFNG DPYRKTKTIA CIIGEDGYFK SVNGEEAANP
     WDYGPHVCSS YVPSLVQL
//
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