ID A0A087GXG9_ARAAL Unreviewed; 812 AA.
AC A0A087GXG9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=Cell division cycle protein 48 {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=AALP_Aa5g163100 {ECO:0000313|EMBL:KFK34571.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK34571.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- SIMILARITY: Belongs to the AAA ATPase family.
CC {ECO:0000256|ARBA:ARBA00006914}.
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DR EMBL; CM002873; KFK34571.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087GXG9; -.
DR EnsemblPlants; KFK34571; KFK34571; AALP_AA5G163100.
DR Gramene; KFK34571; KFK34571; AALP_AA5G163100.
DR eggNOG; KOG0730; Eukaryota.
DR OMA; MLPDDTC; -.
DR OrthoDB; 168438at2759; -.
DR Proteomes; UP000029120; Chromosome 5.
DR GO; GO:0005829; C:cytosol; IEA:EnsemblPlants.
DR GO; GO:0005654; C:nucleoplasm; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0045732; P:positive regulation of protein catabolic process; IEA:EnsemblPlants.
DR CDD; cd19519; RecA-like_CDC48_r1-like; 1.
DR CDD; cd19528; RecA-like_CDC48_r2-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 3.10.330.10; -; 1.
DR Gene3D; 6.10.20.150; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR005938; AAA_ATPase_CDC48.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR009010; Asp_de-COase-like_dom_sf.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR004201; Cdc48_dom2.
DR InterPro; IPR029067; CDC48_domain_2-like_sf.
DR InterPro; IPR003338; CDC4_N-term_subdom.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR01243; CDC48; 1.
DR PANTHER; PTHR23077; AAA-FAMILY ATPASE; 1.
DR PANTHER; PTHR23077:SF180; CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D; 1.
DR Pfam; PF00004; AAA; 2.
DR Pfam; PF17862; AAA_lid_3; 2.
DR Pfam; PF02933; CDC48_2; 1.
DR Pfam; PF02359; CDC48_N; 1.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01072; CDC48_2; 1.
DR SMART; SM01073; CDC48_N; 1.
DR SUPFAM; SSF50692; ADC-like; 1.
DR SUPFAM; SSF54585; Cdc48 domain 2-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00674; AAA; 2.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306};
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 30..113
FT /note="CDC48 N-terminal subdomain"
FT /evidence="ECO:0000259|SMART:SM01073"
FT DOMAIN 130..196
FT /note="CDC48"
FT /evidence="ECO:0000259|SMART:SM01072"
FT DOMAIN 241..377
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 514..653
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT REGION 771..812
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 771..790
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 812 AA; 90147 MW; 51D915D90F164CE6 CRC64;
MADQAESSDS KGTKRDFSTA ILERKKAANR LVVDEAINDD NSVVSLHPET MEKLHLFRGD
TVLLKGKKRK DTVCIALADE TCDEPKIRMN KVVRSNLRVR LGDVISVHQC PDVKYGKRVH
ILPIDDTIEG VSGNIFDAYL KPYFLEAYRP VRKGDLFLVR GGMRSIEFKV IETDPAEYCV
VAPDTEIFCE GEPIKREDEE RLDEVGYDDV GGVRKQMAQI RELVELPLRH PQLFKSIGVK
PPKGILLYGP PGSGKTLIAR AVANETGAFF FCINGPEIMS KLAGESESNL RKAFEEAEKN
APSIIFIDEI DSIAPKREKT HGEVERRIVS QLLTLMDGLK SRAHVIVMGA TNRPNSIDAA
LRRFGRFDRE IDIGVPDEIG RLEVLRIHTK NMKLAEDVDL ERASKDTHGY VGADLAALCT
EAALQCIREK MDVIDLEDEE IDAEILNSMA VTNEHFQTAL GNSNPSALRE TVVEVPNVSW
EDIGGLENVK RELQETVQYP VEHPEKFEKF GMSPSKGVLF YGPPGCGKTL LAKAIASECQ
ANFISIKGPE LLTMWFGESE ANVREIFDKA RQSAPCVLFF DELDSIATQR GSSVGDAGGA
ADRVLNQLLT EMDGMSAKKT VFIIGATNRP DIIDPALLRP GRLDQLIYIP LPDEESRYQI
FKSCLRKSPV AKEVDLRALA KHTQGFSGAD ITEICQRSCK YAIREDIEKD IERERKRTES
PEAMEEDTEE EEIAEIKAGH FEESMKFARR SVSDADIRKY QAFAQTLQQS RGIGSEFRFP
ETTGTGTASA SAGVADPFAT SGGTADDDDL YS
//
